Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5 522 2e-143 seq2 172 5e-38 >seq5 Length=10013798 Score = 522 bits (578), Expect = 2e-143 Identities = 1255/1887 (67%), Gaps = 36/1887 (2%) Strand=Plus/Plus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| |||| ||||| | || || || || || |||||||| Sbjct 2424375 CTGGTCGACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATGCC 2424434 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 |||||| || || | |||||| || ||| || || ||| | || || |||| Sbjct 2424435 CGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTCGG 2424494 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| ||||| || || || || ||||| || Sbjct 2424495 GTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATGAAGGCGCCGCGGTCGGCCGC 2424554 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | || ||| ||| || ||||| || |||||||| || | |||| || Sbjct 2424555 CATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTTGATGTC 2424614 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 ||| || | || |||||| |||||||| | ||||| || || || Sbjct 2424615 GGCCGGGATGTTGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTTCTTCAT 2424674 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||| ||| | || ||| || | || |||| ||| |||| ||||| || Sbjct 2424675 CGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCACCTG 2424734 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 |||||||||| | ||||||||| ||||| |||||||| ||| |||| ||||| | || Sbjct 2424735 GAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTC 2424794 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| ||||| ||||| | || || |||||||||||||| | ||| || ||| Sbjct 2424795 GTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCTGTT 2424854 Query 22585 TCTCAAGCCGTGCT--TTGAAATTTTACTCTTG-AGCATCGACCAGTCCCACAGATCGGA 22641 | | |||||||| |||| | | | | ||| || ||| ||||| || || || Sbjct 2424855 GCGGATGCCGTGCTCCTTGA---TCTCGGCGCGCAGCGTCTCCCACTCCCAGAGGTCCGA 2424911 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG--CGACTCGCCGGGCTGCCT 22699 |||| | || || |||||| ||| | || | | ||| ||| ||||| || Sbjct 2424912 CGGCTTGACGTT---CCACATGTCGAACTGGAGGATGCCCTCCGAG--GCCGGCGATCCC 2424966 Query 22700 TCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCG 22759 || | || |||||| || | | || || ||| | || || || || Sbjct 2424967 TCAAAGGTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTCCGTCAGGGCCGCG 2425026 Query 22760 TAATATATAGTCTCGAAGATTTTCTTGTTCAATTCG-GCGGC---GGCGACGCTTTCGTA 22815 | || || ||||||||||| | |||||||| ||| ||| | || ||| ||| | Sbjct 2425027 TGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGGAC----TCGAA 2425082 Query 22816 CGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCG 22875 ||||| |||| | | ||| ||||| || | ||||| ||||| | ||||| ||||| Sbjct 2425083 GGGCATGCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGATGGGTCG 2425142 Query 22876 GTTTTTCAGATTCGACACTTTTGC----CTCGGGCAAAGGATACCAATTCGAATCGATTG 22931 || | || || |||| ||| | | || || || ||||| Sbjct 2425143 GTGGCGGAAGTTG----CTGTTGCGCGCCTCCTGGACGGGGTAGTGGTTGACGTCGATGA 2425198 Query 22932 TTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAA 22991 | | ||| | ||| | | || | ||| | | |||||||| Sbjct 2425199 TGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGTCGTAGC 2425258 Query 22992 CGCCCGA-TTGTA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCA 23048 |||| ||||| | ||||| | ||||| ||| || || ||||| ||||||| Sbjct 2425259 AGCCCTCGTTGTAGTCGACAAAGGCCGGCAGGGCGAGCGACGCGAGGTTGCAGACGGCCA 2425318 Query 23049 CCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGC 23108 ||||||| | || |||||| | || ||||| || || ||| | ||||| | Sbjct 2425319 CCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCC 2425378 Query 23109 CCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGC 23168 | | || |||||||||| || || ||||||| |||||||| |||||| | || ||| Sbjct 2425379 CGAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGC 2425438 Query 23169 CCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCA 23228 ||||||| ||| | ||||| ||||| ||| | |||| ||| | || |||| Sbjct 2425439 CCGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGAC-CGTCTTG 2425497 Query 23229 CGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAG 23287 || | | ||| || ||||||||||| ||||| ||| || || ||| | ||||| ||| Sbjct 2425498 CGGCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAG 2425557 Query 23288 TCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACG 23347 ||||| |||||||| | | | || |||||||| |||| || || || ||| Sbjct 2425558 TCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACG 2425617 Query 23348 CGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCC 23407 || |||| || || || || ||||| || ||| |||||| ||||| |||||||||||| Sbjct 2425618 CGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCC 2425677 Query 23408 TCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCG 23467 || |||||| |||||| || || | ||| || || ||||| || |||||||| || Sbjct 2425678 TCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCC 2425737 Query 23468 AGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 ||||| | ||| || |||||||| | ||| ||||||||||| |||||||| ||||||||| Sbjct 2425738 AGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTG 2425797 Query 23528 TTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA 23587 |||||| | || | ||||| ||| || |||||||| | ||| ||| || | Sbjct 2425798 TTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATG 2425857 Query 23588 CTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGAT 23647 || || | || || | | ||| | || || || ||||| ||| || || || Sbjct 2425858 TAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAG 2425917 Query 23648 ATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCG 23707 ||||| ||||| || || |||||||||||||||||||||||||| || || | || Sbjct 2425918 ATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCG 2425977 Query 23708 ACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTG 23767 || | ||| ||||| |||| ||||| | ||||| |||| ||| || ||||| | Sbjct 2425978 ACGAGGAAGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAG 2426037 Query 23768 GCGTGCGTAAAGTATC-CATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTC 23826 |||||||| || ||| ||||||| ||||||||||| |||||| || || |||| Sbjct 2426038 GCGTGCGTGAA-CATCTTGCTCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTT 2426096 Query 23827 CTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGAC 23886 || || || |||| | |||||||| ||||||| || |||| |||||| | Sbjct 2426097 GTCGCCCCAGATGCCGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTT 2426156 Query 23887 GCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTT 23946 |||||| | |||| || || || || | | || || || ||||| || | ||||| Sbjct 2426157 GCCGTTGAGCTTGAGGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTT 2426216 Query 23947 AAAGTCACGATCGTGCACTATGGCCGA 23973 ||||| || |||| || |||||||| Sbjct 2426217 GAAGTCGCGGTCGTAGACGATGGCCGA 2426243 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| |||| ||||| |||||||| | || || ||| |||| Sbjct 3224656 CATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTC 3224715 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGA-ATAGCGGACAAGGAAGGCGTGCCGCCCGACC 31310 |||| |||| | || ||| || | || ||||||||| ||| | |||||||||| Sbjct 3224716 GGACACAATCGACAACGT-AAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 3224774 Query 31311 AGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATA 31370 ||||||| || || ||||| ||||| ||| | || ||| || ||||||| || | Sbjct 3224775 AGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACA 3224834 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || || || ||||| ||||| ||||| | ||| | ||||| Sbjct 3224835 ACATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGG 3224883 Score = 82.4 bits (90), Expect = 7e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 31217 ACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAACAG 31276 || ||||| || ||||| | || || || |||| |||| |||| | ||||| | Sbjct 3223933 ACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGTCG 3223992 Query 31277 AGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCAAA 31336 | || ||||||||| ||| | || |||||||||||||| || || ||||| ||||| Sbjct 3223993 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 3224052 Query 31337 CAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTCAT 31396 ||| | || || ||| || |||||| ||||| || || || ||||| || || Sbjct 3224053 CAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCCAC 3224112 Query 31397 CTGGTACT 31404 || || || Sbjct 3224113 CTCGTCCT 3224120 >seq2 Length=5461500 Score = 172 bits (190), Expect = 5e-38 Identities = 339/493 (69%), Gaps = 19/493 (4%) Strand=Plus/Plus Query 57958 CCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCA 58017 ||||||||||| | || || | || || |||||||||||||| || ||| || | | Sbjct 1981774 CCACGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTC-TTCAGCGGT 1981832 Query 58018 GCTTT-GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGC 58076 ||||| || |||| || ||| ||||||| ||||| || ||||| || ||||| || | Sbjct 1981833 GCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCC 1981892 Query 58077 AACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCT 58136 |||||| | || ||||| || |||||||| || || |||||||||||||| || | || Sbjct 1981893 AACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGCGTGCCTGTTGCATTCG 1981952 Query 58137 CACATTGTCAATAAACCGAC--GCGGGATCG-CATCTTGGACATTATCACCGAGGCGGTC 58193 ||| |||| || | | | || || | |||| ||||| |||||||| || ||| Sbjct 1981953 CAC---CTCAACAACCGGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTC 1982009 Query 58194 GCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAAT 58253 | || || | ||||| ||||||| ||||| || || ||||||| ||||| Sbjct 1982010 ACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCTCTGCTCGGCATGAATGCC 1982069 Query 58254 GATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGAC----TTTTGCTCGAACTGAT 58309 |||||| ||||||| ||||| |||||||| | | | |||||| | | Sbjct 1982070 ACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCTTGTTGCTC--TCGGCA 1982127 Query 58310 TGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGA 58369 |||| || ||||| || || || || || || ||| | ||||| |||| Sbjct 1982128 ACGAGAAGGT--GTACAAATCGTCGAACCCCTTCGACTTCATGGAGAACATCTCCCTCGG 1982185 Query 58370 GGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATG-- 58427 |||||||| || || ||||| ||| ||| ||| |||||||| |||||| || Sbjct 1982186 TGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAAAAGGCCGGCGTTCTGGC 1982245 Query 58428 -AGCGGTAACAAG 58439 ||||| | |||| Sbjct 1982246 CAGCGGCACCAAG 1982258 Score = 91.5 bits (100), Expect = 1e-13 Identities = 227/340 (67%), Gaps = 15/340 (4%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| | |||||| | || || Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||| || ||| ||| | || | || || |||| | |||| | Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 1981431 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || || |||||||| || || || || || |||||||| | |||||| | Sbjct 1981432 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACG- 1981490 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 ||||| | | |||||| | | ||||| | ||||| ||||| || ||| | | Sbjct 1981491 -TTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGA 1981549 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG 57864 | ||||| | || || || | || ||||| | ||||| ||||| | ||||| ||| Sbjct 1981550 TGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGAGCACG 1981609 Query 57865 A----CGAGAAACGTAGACTGTTCAACGCGATCGAAACAA 57900 ||||| ||| ||||||||||| || || |||| Sbjct 1981610 CTCAGCGAGA---GTAT-CTGTTCAACGCCATTGACACAA 1981645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765982094000