Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq5 141 1e-28 >seq5 Length=10013798 Score = 141 bits (156), Expect = 1e-28 Identities = 446/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Plus Query 63234 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63293 || ||||| | || ||| || |||| | || || || ||||| ||||| || || ||| Sbjct 2425582 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 2425641 Query 63294 CAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63353 || || || | || || || | | | ||||| || || ||||| || Sbjct 2425642 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 2425701 Query 63354 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63413 ||||| ||| | | || || | ||||||||||||| ||| ||||| | | || ||| Sbjct 2425702 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 2425761 Query 63414 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63473 || ||||| || ||||| || | ||| | || ||||| || | || | | ||| || Sbjct 2425762 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 2425821 Query 63474 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTA 63533 | || ||||| || |||| ||||| |||| || ||| ||| |||| || || Sbjct 2425822 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 2425881 Query 63534 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 63592 || || || || || || ||||| || ||||| | ||||| ||| || | ||| Sbjct 2425882 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 2425940 Query 63593 GTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63652 ||| |||||||| || ||||| || || |||||| | || || || |||| || Sbjct 2425941 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 2426000 Query 63653 GTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AG 63711 | | || || || || || | || || || |||||||| || ||| || | | Sbjct 2426001 CGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCG 2426059 Query 63712 AAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTA 63765 | | |||||||||||||| || | || || | |||| |||| || | Sbjct 2426060 ACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----CCGA 2426113 Query 63766 CTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACA 63825 | | || ||||| | ||||||||| |||| || || || ||| ||| | || | | Sbjct 2426114 CCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGA 2426173 Query 63826 AGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAA 63885 ||||||| || | ||| || || ||||| || | ||| ||||| || ||||| | Sbjct 2426174 GGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGA 2426233 Query 63886 TAATAACCGAATTGAGCTTATCCTT 63910 || |||| | ||||| ||||| Sbjct 2426234 CGATGGCCGAGTCGAGCTCCTCCTT 2426258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817009546000