Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 9e-15 seq2 84.2 2e-11 >seq5 Length=10013798 Score = 95.1 bits (104), Expect = 9e-15 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33575 AGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633 |||| |||||||||||||| ||| |||||| ||||||||||| |||| ||| |||| Sbjct 5548018 AGATCGGCGACAAGTTTGCCTCGCGTCACGG-GCAGAAGGGCACCATCGGCGTGACGTAC 5548076 Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693 ||| ||||||||| |||||| || ||||| || ||| | |||||||||| Sbjct 5548077 CGGCAGGAGGACATGCCCTTCACGCGGGAGGGCGTCACGCCCGACATCATCATCAACCCT 5548136 Query 33694 CATGCGTTCCCCTCGCGCATGACG 33717 || ||| | || ||||| |||||| Sbjct 5548137 CACGCGATTCCGTCGCGAATGACG 5548160 >seq2 Length=5461500 Score = 84.2 bits (92), Expect = 2e-11 Identities = 255/387 (66%), Gaps = 14/387 (4%) Strand=Plus/Plus Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809 |||||||| || || |||||| || | || || | || || | || ||||||||| Sbjct 1981797 GCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTCTGGCTG 1981856 Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869 ||||| || |||||||| || || | || ||||||||| | || ||||| || Sbjct 1981857 AAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGTGATGAG 1981916 Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929 ||||| ||| || ||||| || || || | ||| | ||| ||||| | ||| Sbjct 1981917 GGTCTTCACACCGATTTTGCGTGCCTGTTGCATTCGCACCT--CAA--CAACCGGGCCAG 1981972 Query 22930 GACGATGCACATCAA----ATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985 | || | |||||| ||||| | || ||||| ||||||| || ||| || Sbjct 1981973 CAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCAC 1982032 Query 22986 AGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATAC 23044 ||||| || | || || || |||||| | || | |||| | |||||| Sbjct 1982033 CGAGGCCCTCCCATGTGCTCTGCTCGGCATGAAT-GCCACCTTGATGAAGCAGTACATCG 1982091 Query 23045 AGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA--CGTTGC 23102 |||| ||||| ||||| || || | ||| || || | | ||| |||| || ||| | Sbjct 1982092 AGTTCGTTGCCGATCGTCTCCTTGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGT--C 1982149 Query 23103 CAATCCATTTGATTTCATGGATAACAT 23129 || || || || |||||||| ||||| Sbjct 1982150 GAACCCCTTCGACTTCATGGAGAACAT 1982176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233274380225