Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq5 95.1 9e-15
seq2 84.2 2e-11
>seq5
Length=10013798
Score = 95.1 bits (104), Expect = 9e-15
Identities = 109/144 (76%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 33575 AGATGGGCGACAAGTTTGCATCG-TTCACGGCCCAGAAGGGCACGTGCGGCATGATGTAC 33633
|||| |||||||||||||| ||| |||||| ||||||||||| |||| ||| ||||
Sbjct 5548018 AGATCGGCGACAAGTTTGCCTCGCGTCACGG-GCAGAAGGGCACCATCGGCGTGACGTAC 5548076
Query 33634 GACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCG 33693
||| ||||||||| |||||| || ||||| || ||| | ||||||||||
Sbjct 5548077 CGGCAGGAGGACATGCCCTTCACGCGGGAGGGCGTCACGCCCGACATCATCATCAACCCT 5548136
Query 33694 CATGCGTTCCCCTCGCGCATGACG 33717
|| ||| | || ||||| ||||||
Sbjct 5548137 CACGCGATTCCGTCGCGAATGACG 5548160
>seq2
Length=5461500
Score = 84.2 bits (92), Expect = 2e-11
Identities = 255/387 (66%), Gaps = 14/387 (4%)
Strand=Plus/Plus
Query 22750 GCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTG 22809
|||||||| || || |||||| || | || || | || || | || |||||||||
Sbjct 1981797 GCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTCTGGCTG 1981856
Query 22810 AAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAA 22869
||||| || |||||||| || || | || ||||||||| | || ||||| ||
Sbjct 1981857 AAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGTGATGAG 1981916
Query 22870 GGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTCAG 22929
||||| ||| || ||||| || || || | ||| | ||| ||||| | |||
Sbjct 1981917 GGTCTTCACACCGATTTTGCGTGCCTGTTGCATTCGCACCT--CAA--CAACCGGGCCAG 1981972
Query 22930 GACGATGCACATCAA----ATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCA 22985
| || | |||||| ||||| | || ||||| ||||||| || ||| ||
Sbjct 1981973 CAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCAC 1982032
Query 22986 AGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGTACATAC 23044
||||| || | || || || |||||| | || | |||| | ||||||
Sbjct 1982033 CGAGGCCCTCCCATGTGCTCTGCTCGGCATGAAT-GCCACCTTGATGAAGCAGTACATCG 1982091
Query 23045 AGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAA--CGTTGC 23102
|||| ||||| ||||| || || | ||| || || | | ||| |||| || ||| |
Sbjct 1982092 AGTTCGTTGCCGATCGTCTCCTTGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGT--C 1982149
Query 23103 CAATCCATTTGATTTCATGGATAACAT 23129
|| || || || |||||||| |||||
Sbjct 1982150 GAACCCCTTCGACTTCATGGAGAACAT 1982176
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356233274380225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |