Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5 161 1e-34 seq2 100 4e-16 >seq5 Length=10013798 Score = 161 bits (178), Expect = 1e-34 Identities = 482/732 (66%), Gaps = 20/732 (3%) Strand=Plus/Plus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||||||||| || | ||| | | || || || |||| || ||||| | || | Sbjct 2425537 TCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTC 2425596 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || || | | || || || ||||| ||||| || || ||||| || || | || Sbjct 2425597 CAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAAC 2425656 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040 || || | | | |||||| || || ||||| || ||||| ||| | | | Sbjct 2425657 AGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAA 2425716 Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100 | || | ||||||||||||| ||| ||||| | | ||||| || ||||| || ||| Sbjct 2425717 ACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCC 2425776 Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160 || || | ||| | || ||||| || | || | | ||| || | || || ||||| Sbjct 2425777 TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAG 2425836 Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220 ||||| ||||| |||| || ||| ||| |||| || || || || || Sbjct 2425837 GTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCG 2425896 Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTC 80279 || || || ||||| || ||||| | ||||| ||| || | ||| || ||||||||||| Sbjct 2425897 ATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTC 2425955 Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGT 80336 ||||| || || |||||| | || || || |||| || || || | || Sbjct 2425956 GATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--GT 2426012 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AGACAGTAGATTGT 80395 || || || || | || || || |||||||| || ||| || | |||| ||||||| Sbjct 2426013 GCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTGT 2426071 Query 80396 ACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGAATTCCTACCGCGACACGCAT 80450 ||||||| || ||| ||| | | ||| |||| || |||| || ||||| Sbjct 2426072 ACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACCGACACGCGCAT 2426126 Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510 | ||||||||| |||| || ||||||||| || | || | | ||| ||| || Sbjct 2426127 GATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCTC 2426186 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 | ||| || || ||||| || | ||| ||||| || ||||| | || |||||| Sbjct 2426187 GAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTC 2426246 Query 80571 GAGTTTATCCTT 80582 ||| | ||||| Sbjct 2426247 GAGCTCCTCCTT 2426258 >seq2 Length=5461500 Score = 100 bits (110), Expect = 4e-16 Identities = 148/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || |||||| ||| |||||||| || | || || |||||||| || || || Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || ||||| || || || || || | || |||||| Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || ||||| || |||||||||||||||||||| | | | ||| | |||| || Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGG 1981760 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 ||||| | |||||||| |||||||| Sbjct 1981759 ATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268126623000