Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5 152 7e-32
seq2 91.5 2e-13
>seq5
Length=10013798
Score = 152 bits (168), Expect = 7e-32
Identities = 482/733 (66%), Gaps = 22/733 (3%)
Strand=Plus/Plus
Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002
||||||||||| || | ||| | | | | || || || || || || ||||| | |
Sbjct 2425537 TCGAACTCGTCGCCGTA-GCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGT 2425595
Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062
||| || || | | | || || ||||| ||||| || || ||||| || || | ||
Sbjct 2425596 CCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAA 2425655
Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122
|| || | | | |||||| || || ||||| || ||||| ||| | |
Sbjct 2425656 CAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAA 2425715
Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182
|| || | ||||||||||||| ||| ||||| | | |||||||| ||||| || ||
Sbjct 2425716 AACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCC 2425775
Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242
||| || | ||| | || ||||| || | || | | ||| || | || || |||||
Sbjct 2425776 CTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGA 2425835
Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302
| ||| ||||| |||| || ||| ||| |||| || || | || || ||
Sbjct 2425836 GGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCC 2425895
Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCT 72361
|| || || ||||| || ||||| | ||||| ||| || | ||| || ||||||||||
Sbjct 2425896 GATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCT 2425954
Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAG 72418
| || || || ||| |||||| | || || || |||| || || || | |
Sbjct 2425955 CGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--G 2426011
Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AGACAGTAGATTG 72477
| || || || || | || || || |||||||| || ||| || | |||| ||||||
Sbjct 2426012 TGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTG 2426070
Query 72478 TACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCA 72532
|||||||| || ||| ||| | | ||| |||| || |||| || ||||
Sbjct 2426071 TACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACCGACACGCGCA 2426125
Query 72533 TTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTT 72592
| | ||| ||||| |||| || ||||||||| || | || | | ||||||| |
Sbjct 2426126 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 2426185
Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652
| | ||| || || ||||| || | ||| ||||| || ||||| | || |||| |
Sbjct 2426186 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 2426245
Query 72653 TGAGTTTATCCTT 72665
||| | |||||
Sbjct 2426246 CGAGCTCCTCCTT 2426258
Score = 95.1 bits (104), Expect = 2e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| ||||| | || ||||||| ||| || || |||||||||
Sbjct 2424373 TCCTGGTCGACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATG 2424432
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || || ||||| |||| ||| ||| ||||| ||||| | ||| | |
Sbjct 2424433 CCCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTC 2424492
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
|| || |||||||| || | |||||| || ||||||||||| || | ||| ||
Sbjct 2424493 GGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATGAAGGCGCCGCGGTCGGCC 2424552
Query 70969 GCCAT 70973
|||||
Sbjct 2424553 GCCAT 2424557
>seq2
Length=5461500
Score = 91.5 bits (100), Expect = 2e-13
Identities = 147/210 (70%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| || |||||| ||| ||||||||||| | || | |||||||| || || ||
Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| ||||| || || ||||| || ||||| || || || || || | || ||||||
Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC----TGTCATG 42240
|| ||||| || || |||||||||| |||||| | | ||| | || |||| ||
Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGC-GAACGTGGACTCCTTGTCTTG 1981761
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
||||| | |||||||| ||||||||
Sbjct 1981760 GATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138570807000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |