Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5 152 7e-32 seq2 91.5 2e-13 >seq5 Length=10013798 Score = 152 bits (168), Expect = 7e-32 Identities = 482/733 (66%), Gaps = 22/733 (3%) Strand=Plus/Plus Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 ||||||||||| || | ||| | | | | || || || || || || ||||| | | Sbjct 2425537 TCGAACTCGTCGCCGTA-GCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGT 2425595 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| || || | | | || || ||||| ||||| || || ||||| || || | || Sbjct 2425596 CCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAA 2425655 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 || || | | | |||||| || || ||||| || ||||| ||| | | Sbjct 2425656 CAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAA 2425715 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 || || | ||||||||||||| ||| ||||| | | |||||||| ||||| || || Sbjct 2425716 AACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCC 2425775 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| || | ||| | || ||||| || | || | | ||| || | || || ||||| Sbjct 2425776 CTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGA 2425835 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302 | ||| ||||| |||| || ||| ||| |||| || || | || || || Sbjct 2425836 GGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCC 2425895 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCT 72361 || || || ||||| || ||||| | ||||| ||| || | ||| || |||||||||| Sbjct 2425896 GATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCT 2425954 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAG 72418 | || || || ||| |||||| | || || || |||| || || || | | Sbjct 2425955 CGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--G 2426011 Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AGACAGTAGATTG 72477 | || || || || | || || || |||||||| || ||| || | |||| |||||| Sbjct 2426012 TGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTG 2426070 Query 72478 TACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCA 72532 |||||||| || ||| ||| | | ||| |||| || |||| || |||| Sbjct 2426071 TACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACCGACACGCGCA 2426125 Query 72533 TTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTT 72592 | | ||| ||||| |||| || ||||||||| || | || | | ||||||| | Sbjct 2426126 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 2426185 Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 | | ||| || || ||||| || | ||| ||||| || ||||| | || |||| | Sbjct 2426186 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 2426245 Query 72653 TGAGTTTATCCTT 72665 ||| | ||||| Sbjct 2426246 CGAGCTCCTCCTT 2426258 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||| ||||| | || ||||||| ||| || || ||||||||| Sbjct 2424373 TCCTGGTCGACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATG 2424432 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || || ||||| |||| ||| ||| ||||| ||||| | ||| | | Sbjct 2424433 CCCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTC 2424492 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || |||||||| || | |||||| || ||||||||||| || | ||| || Sbjct 2424493 GGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATGAAGGCGCCGCGGTCGGCC 2424552 Query 70969 GCCAT 70973 ||||| Sbjct 2424553 GCCAT 2424557 >seq2 Length=5461500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || |||||| ||| ||||||||||| | || | |||||||| || || || Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || || ||||| || ||||| || || || || || | || |||||| Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC----TGTCATG 42240 || ||||| || || |||||||||| |||||| | | ||| | || |||| || Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGC-GAACGTGGACTCCTTGTCTTG 1981761 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 ||||| | |||||||| |||||||| Sbjct 1981760 GATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138570807000