Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq5 190 3e-43
seq2 165 1e-35
>seq5
Length=10013798
Score = 190 bits (210), Expect = 3e-43
Identities = 345/497 (69%), Gaps = 6/497 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||||||||| || ||||| ||||| | ||| ||||| ||||||| |||||||| |||
Sbjct 2425778 CAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGAC 2425719
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|||||||| ||| |||| ||||||| ||| ||| || |||| || || | |||
Sbjct 2425718 GTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGAC 2425659
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || |||||| | || || | ||||||||||||||| | | ||| ||
Sbjct 2425658 CTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGAC 2425599
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || ||||| || |||| |||| ||||| |||||
Sbjct 2425598 TGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTC 2425539
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| ||||||| |||||||| || ||||| ||| || |
Sbjct 2425538 GAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACG-GTCCGCGC-CC 2425481
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | | ||| | ||| ||| ||||| || | || | ||| || |
Sbjct 2425480 AGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGT 2425421
Query 97234 ACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
||||||| |||| || ||||| |||||||| || | || || ||| |||||
Sbjct 2425420 ACAAGGA-CGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAGCTCC 2425362
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| |||||||| || || | |||||| | | || |||||| ||| || ||| ||
Sbjct 2425361 AACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTC 2425302
Query 97353 GCATCGGTCAATCTGCC 97369
|| ||| || |||||
Sbjct 2425301 GCGTCGCTCGCCCTGCC 2425285
>seq2
Length=5461500
Score = 165 bits (182), Expect = 1e-35
Identities = 213/289 (74%), Gaps = 4/289 (1%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| ||||| ||||||| ||||||| |||||||
Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | ||||||| ||| |||||| | || | |||
Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 1981431
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197
|||||| | || ||||| |||| || || |||||||||||||| || | ||| || |||
Sbjct 1981432 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGA-ACG 1981490
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| ||| || || || |||| ||| ||||| ||||| |||||||||||||
Sbjct 1981491 TTTCAGCGGCGAGGTGCAAATCCCCGAGG-CTCGCTGCTTCTACGGTTTCCAAATCATGA 1981549
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
| || || | ||||| || | ||||| |||| ||| ||||||
Sbjct 1981550 TGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACAT 1981598
Score = 138 bits (152), Expect = 2e-27
Identities = 348/517 (67%), Gaps = 29/517 (6%)
Strand=Plus/Plus
Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407
||| || || | || || || |||||| | |||| | || |||||| | ||| | |
Sbjct 1981712 CACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGA 1981771
Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467
||| ||| |||| | ||||| || || || |||||||| || ||||||||||| ||
Sbjct 1981772 GTCCACGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGG 1981831
Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527
| ||| || | ||||| ||||| ||||||||||| |||||||| || ||||| |
Sbjct 1981832 TGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTC 1981891
Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587
|||||| | || || || || ||||| || ||| || |||| | | | ||||| |
Sbjct 1981892 CAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTGC--CTGTTGC- 1981947
Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAAC 125644
|| || | | | | | ||||| | |||||||||| |||| | ||
Sbjct 1981948 -----ATTCGCACCTCAACAACCGGGCCAGC---AAGAAGGTCATCAACGACATCATCAC 1981999
Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTG 125703
||| ||||| | || || || ||||| || ||||| |||| || | || || | |
Sbjct 1982000 CGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCG 1982058
Query 125704 GCATGAACTGCAAGC-TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTAC 125762
||||||| ||| | | | ||| ||||||| ||||| || || |||||||| ||
Sbjct 1982059 GCATGAA-TGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT---- 1982113
Query 125763 GAGTTG--ATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCA 125817
|||| | ||| || ||| | ||||| | ||| ||||| || |||||| |
Sbjct 1982114 -TGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGA 1982172
Query 125818 GCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAA 125854
||| || || | || |||||||| || ||||||||
Sbjct 1982173 ACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAA 1982209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741058505257000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |