Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq5 190 3e-43 seq2 165 1e-35 >seq5 Length=10013798 Score = 190 bits (210), Expect = 3e-43 Identities = 345/497 (69%), Gaps = 6/497 (1%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||||||||| || ||||| ||||| | ||| ||||| ||||||| |||||||| ||| Sbjct 2425778 CAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGAC 2425719 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 |||||||| ||| |||| ||||||| ||| ||| || |||| || || | ||| Sbjct 2425718 GTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGAC 2425659 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || |||||| | || || | ||||||||||||||| | | ||| || Sbjct 2425658 CTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGCGAC 2425599 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || ||||| || |||| |||| ||||| ||||| Sbjct 2425598 TGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTC 2425539 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174 ||||| |||| ||||||| |||||||| || ||||| ||| || | Sbjct 2425538 GAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACG-GTCCGCGC-CC 2425481 Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233 |||| || ||| | | ||| | ||| ||| ||||| || | || | ||| || | Sbjct 2425480 AGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGT 2425421 Query 97234 ACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292 ||||||| |||| || ||||| |||||||| || | || || ||| ||||| Sbjct 2425420 ACAAGGA-CGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAGCTCC 2425362 Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352 || |||||||| || || | |||||| | | || |||||| ||| || ||| || Sbjct 2425361 AACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTC 2425302 Query 97353 GCATCGGTCAATCTGCC 97369 || ||| || ||||| Sbjct 2425301 GCGTCGCTCGCCCTGCC 2425285 >seq2 Length=5461500 Score = 165 bits (182), Expect = 1e-35 Identities = 213/289 (74%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| ||||| ||||||| ||||||| ||||||| Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||||||| ||| |||||| | || | ||| Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 1981431 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATC-TGTTGACACG 125197 |||||| | || ||||| |||| || || |||||||||||||| || | ||| || ||| Sbjct 1981432 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGA-ACG 1981490 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 ||| ||| || || || |||| ||| ||||| ||||| ||||||||||||| Sbjct 1981491 TTTCAGCGGCGAGGTGCAAATCCCCGAGG-CTCGCTGCTTCTACGGTTTCCAAATCATGA 1981549 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305 | || || | ||||| || | ||||| |||| ||| |||||| Sbjct 1981550 TGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACAT 1981598 Score = 138 bits (152), Expect = 2e-27 Identities = 348/517 (67%), Gaps = 29/517 (6%) Strand=Plus/Plus Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 ||| || || | || || || |||||| | |||| | || |||||| | ||| | | Sbjct 1981712 CACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGA 1981771 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 ||| ||| |||| | ||||| || || || |||||||| || ||||||||||| || Sbjct 1981772 GTCCACGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGG 1981831 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 | ||| || | ||||| ||||| ||||||||||| |||||||| || ||||| | Sbjct 1981832 TGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTC 1981891 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCG 125587 |||||| | || || || || ||||| || ||| || |||| | | | ||||| | Sbjct 1981892 CAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTGC--CTGTTGC- 1981947 Query 125588 CAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCA---ACATTGTAAC 125644 || || | | | | | ||||| | |||||||||| |||| | || Sbjct 1981948 -----ATTCGCACCTCAACAACCGGGCCAGC---AAGAAGGTCATCAACGACATCATCAC 1981999 Query 125645 CGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGC-ATGATTG 125703 ||| ||||| | || || || ||||| || ||||| |||| || | || || | | Sbjct 1982000 CGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCG 1982058 Query 125704 GCATGAACTGCAAGC-TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTAC 125762 ||||||| ||| | | | ||| ||||||| ||||| || || |||||||| || Sbjct 1982059 GCATGAA-TGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT---- 1982113 Query 125763 GAGTTG--ATTGGC--CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCA 125817 |||| | ||| || ||| | ||||| | ||| ||||| || |||||| | Sbjct 1982114 -TGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGA 1982172 Query 125818 GCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAA 125854 ||| || || | || |||||||| || |||||||| Sbjct 1982173 ACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAA 1982209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058505257000