Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 104 4e-18 seq1 86.0 1e-12 >seq5 Length=10013798 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||| ||||| || || Sbjct 3990361 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACGAAGCCTGCCAT 3990419 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||||||||| || ||||||||| |||||| Sbjct 3990420 CCGACGTCTCGCTCGTCGTGGCGGTGTCAAGCGTATCTCTG 3990460 >seq1 Length=2797149 Score = 86.0 bits (94), Expect = 1e-12 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||| || ||||||||||| || || || |||||||| || Sbjct 1194687 GCCAAGCGCCACCGTAAGAT-TCTCCGTGATAACATCCAGGGCATAACGAAGCCAGCGAT 1194745 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| ||||| |||||||| || |||||| | |||| Sbjct 1194746 CCGACGTCTCGCTCGCCGTGGTGGCGTGAAGCGTATTTCTG 1194786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075131426975