Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq5 147 3e-30
>seq5
Length=10013798
Score = 147 bits (162), Expect = 3e-30
Identities = 451/688 (66%), Gaps = 22/688 (3%)
Strand=Plus/Plus
Query 63183 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63242
|| ||||| | || ||| || |||| | || || || ||||| ||||| || || |||
Sbjct 2425582 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 2425641
Query 63243 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63302
|| || || | || || || | | | ||||| || || ||||| ||
Sbjct 2425642 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 2425701
Query 63303 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63362
||||| ||| | | || || | ||||||||||||| ||| ||||| | | || |||
Sbjct 2425702 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 2425761
Query 63363 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63422
|| ||||| || ||||| || | ||| | || ||||| || | || | | ||| ||
Sbjct 2425762 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 2425821
Query 63423 ATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTA 63482
| || ||||| || |||| ||||| |||| || ||| ||| |||| || ||
Sbjct 2425822 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 2425881
Query 63483 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 63541
|| || || || || || ||||| || ||||| | ||||| ||| || | |||
Sbjct 2425882 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 2425940
Query 63542 GTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTG 63601
||| ||||| ||||| ||||| || || |||||| | || || || |||| ||
Sbjct 2425941 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 2426000
Query 63602 ---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 63658
|| || | || || || || || | || || || |||||||| || ||| || |
Sbjct 2426001 CGCCTG-CGGC--GTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 2426056
Query 63659 -AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTC 63711
|| | |||||||||||||| || | || || | |||| |||| |
Sbjct 2426057 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----C 2426110
Query 63712 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 63771
| || | || ||||| | ||||||||| |||| || ||||||||| ||| | || |
Sbjct 2426111 CGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGA 2426170
Query 63772 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 63831
| ||||||| || | ||| || || ||||| || | ||| ||||| || ||||
Sbjct 2426171 GGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 2426230
Query 63832 AAATAATAACCGAGTTGAGTTTATCCTT 63859
| | || |||||| ||| | |||||
Sbjct 2426231 AGACGATGGCCGAGTCGAGCTCCTCCTT 2426258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946615987000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |