Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq38 140 2e-28 seq5 96.9 2e-15 >seq38 Length=6689 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5662 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 5603 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 5602 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5568 >seq5 Length=10013798 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 |||| || | ||| |||||||||||||| || || ||||| || ||| ||| || Sbjct 3224871 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 3224812 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | || || ||||| || || ||||| || || |||| |||| ||| || ||| Sbjct 3224811 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 3224752 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAAT 38281 ||| ||| || ||| || || | || || || | || ||| || || || || || Sbjct 3224751 TCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTC-CGACGATTCCACCTCCAACGTGAT 3224693 Query 38282 AGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 || || || ||||| || || ||||| ||||||||| Sbjct 3224692 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 3224656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946893837325