Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq5 147 3e-30 >seq5 Length=10013798 Score = 147 bits (162), Expect = 3e-30 Identities = 478/733 (65%), Gaps = 22/733 (3%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | | || || || || || | || ||||| | || | Sbjct 2425537 TCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTC 2425596 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || || |||| | || || || ||||| ||||| || || ||||| || || | || Sbjct 2425597 CAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAAC 2425656 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | | | ||||| || || ||||| || ||||| ||| | | | Sbjct 2425657 AGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAA 2425716 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | || | ||||||||||||| ||| ||||| | | || ||||| ||||| || ||| Sbjct 2425717 ACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCC 2425776 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | ||| | || ||||| || | || | | ||| || | || || ||||| Sbjct 2425777 TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAG 2425836 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 ||||| ||||| || | || ||| ||| |||| || || || || || Sbjct 2425837 GTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCG 2425896 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTC 63411 || || || ||||| || ||||| | ||||| ||| || | ||| || ||||||||||| Sbjct 2425897 ATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTC 2425955 Query 63412 TATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGT 63468 || || || ||| |||||| | || || || |||| || || || | || Sbjct 2425956 GATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--GT 2426012 Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTC-AGAAAGTAGATTGT 63527 || || || || | || || || ||||| || || ||| || | || | ||||||| Sbjct 2426013 GCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTGT 2426071 Query 63528 ACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTCCTACTGCGACACGCA 63581 ||||||| || | || || | |||| |||| || || | || |||| Sbjct 2426072 ACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----CCGACCGACACGCGCA 2426125 Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641 | | ||||||||| |||| || ||||||||| ||| | || | | ||||||| | Sbjct 2426126 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 2426185 Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701 | | ||| || || ||||| || | ||| ||||| || ||||| | || |||||| Sbjct 2426186 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 2426245 Query 63702 TGAGTTTATCCTT 63714 ||| | ||||| Sbjct 2426246 CGAGCTCCTCCTT 2426258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631405970000