Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq11 111 1e-19 seq5 98.7 8e-16 >seq11 Length=1832425 Score = 111 bits (122), Expect = 1e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || || || | || || || ||| |||| ||||| ||||| | Sbjct 1806603 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1806662 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 |||| ||| | ||| | |||| || || || ||||||||||| || || ||||| Sbjct 1806663 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGAC 1806722 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 ||||| || || || || |||||||| ||| | || ||| ||||||| | ||| ||| Sbjct 1806723 CAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTAC 1806782 Query 22396 AACATTCAAAAAGA 22409 ||||| || || || Sbjct 1806783 AACATCCAGAAGGA 1806796 >seq5 Length=10013798 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || || ||||| || ||| |||| | || |||||| | | Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || ||||| ||||||||||| || || ||||| || Sbjct 3224717 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3224776 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| ||| ||| | ||| |||||| Sbjct 3224777 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 3224836 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||| ||||| | || |||| ||||||| || Sbjct 3224837 ATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGG 3224883 Score = 91.5 bits (100), Expect = 1e-13 Identities = 199/295 (67%), Gaps = 5/295 (2%) Strand=Plus/Plus Query 130101 CAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCC 130160 ||| || || || || ||| |||||||||||||||||| | || || || | ||||| Sbjct 2425698 CAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCC 2425757 Query 130161 CTTCCG---TTTGCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACAT 130217 | ||| ||||| || ||||| |||| || | | |||||| |||| || | ||| Sbjct 2425758 CGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCAT 2425817 Query 130218 TGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAAC 130277 | | | ||||||| || ||||| |||| ||||| | || || || | Sbjct 2425818 GGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGAT 2425877 Query 130278 GTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCA-ATCGCGTA 130336 | || | | | || || ||||||||| | | || || |||| ||||| || | | Sbjct 2425878 GCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTG-A 2425936 Query 130337 GCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATGTTTAGGAGGAAACACGA 130391 |||| || || ||||| |||| ||||| || || |||| | |||||| ||||| Sbjct 2425937 GCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGA 2425991 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || | | || || | ||| || |||| Sbjct 3223933 ACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGTCG 3223992 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || ||||||||||| || || ||||| || || || || || || |||||||| Sbjct 3223993 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAG 3224052 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | |||||| ||| ||| | |||||||||||||| || || || || || Sbjct 3224053 CAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGAC 3224105 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| || || ||||| | | || || | ||| || |||| Sbjct 3224225 ACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCGACAATGTCAAGTCG 3224284 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || ||||| ||||| || || || ||||||||||| Sbjct 3224285 AAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTCATCTTTGCCGGCAAG 3224344 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | ||||| ||| ||| | ||| |||||||| || || || || || Sbjct 3224345 CAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGAAGGAGTCGAC 3224397 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || |||| || || ||||| | | Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| || || || || || Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3224548 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| || || ||||||||||| ||| | ||||| ||| ||| | ||| |||||| Sbjct 3224549 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAAC 3224608 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 3224609 ATCCAGAAGGAGTCGAC 3224625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727616342375