Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 100 6e-16 seq8 95.1 2e-14 >seq5 Length=10013798 Score = 100 bits (110), Expect = 6e-16 Identities = 142/197 (72%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 || || || ||||| || ||||||||||||||||| |||||| | |||||||| || | Sbjct 7639325 GTCGGATCGCTGTCCGGCGGTTGGAAGATGAAGCTCGCCCTCGCCCGCGCCATGCTGCAA 7639266 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||| ||||| ||||| || ||||| ||||||||| | ||| |||||| | || Sbjct 7639265 AAGGCCGACGTCCTGCTGCTCGACGAGCCGACCAACCACCTCGACGTGACCAACATTGCG 7639206 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATG---TTTCTTCCCTCATTGTCTCTCAC 279872 ||| | | ||| || | || | | | | || | | |||||| ||||| ||| Sbjct 7639205 TGGTTGGAAAACTATCT--CAAGAC-GCACACTGACATCACGAGCCTCATCGTCTCCCAC 7639149 Query 279873 GACTCTGGCTTCCTAGA 279889 ||||| |||||||| || Sbjct 7639148 GACTCGGGCTTCCTCGA 7639132 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233 |||| || ||||| || || || ||||| || || ||||| | || || ||||||||| Sbjct 7638844 TCATCGGGCCCAACGGCGCCGGCAAGTCGACGCTCATCAAGCTGCTCACGGGCGAGACCA 7638785 Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292 | || || ||| | | | |||||| || ||| |||| || | ||| || ||| Sbjct 7638784 TCCCGAC-GACGGGCAAGGTCGAGAAGCACCCGAACCTGCGCATCGGCTACATCAAGCAG 7638726 Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352 ||||| || | ||| |||||| ||||| || | ||| || ||||| ||| | |||||| Sbjct 7638725 CACGCCCTCGAGCACGTCGAGATGCACCTCGAGAAGACGCCGAACCAGTACCTGCAGTGG 7638666 Query 280353 CGCTATGC 280360 ||||| || Sbjct 7638665 CGCTACGC 7638658 >seq8 Length=3860646 Score = 95.1 bits (104), Expect = 2e-14 Identities = 178/258 (69%), Gaps = 8/258 (3%) Strand=Plus/Minus Query 279309 GAGGCAAAGGACGAAGCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGAT 279368 ||||| ||| ||| || || ||||| ||| || |||||||| || |||| Sbjct 3126533 GAGGCCGAGGCCGAGGCTGACGAGGAG---GAG---GGCGAGGATCTCTGCAACTGCACC 3126480 Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| ||||| || |||| ||||||||||| ||| || | ||| | |||||| Sbjct 3126479 TTCTCCCTCGCCTACGGTGCCAAGATTCTGCTCAACCAGACTCACCTGCGTCTGAAGCGT 3126420 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 ||| | || || |||||| ||| ||||| || | || ||| ||| || ||||| ||| Sbjct 3126419 GGCCAGCGCTACGGTCTCTGCGGCCCCAACGGTTCCGGCAAGTCCACCCTCATGCGTGCC 3126360 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGT 279547 || |||| ||| | | ||| ||||| | ||| ||||| | ||| || | || Sbjct 3126359 ATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAGCGAGGTCAAGACCGTCTTCGT 3126301 Query 279548 AGAGCACGACATCGACTC 279565 ||||||||| ||||||| Sbjct 3126300 CGAGCACGACCTCGACTC 3126283 Score = 86.0 bits (94), Expect = 1e-11 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| || ||||| ||||| |||||| ||||| ||| ||| || || Sbjct 3125099 CACTCCCGCATGCGTGGTCTGTCTGGTGGCCAGCGTGTCAAGACCGTCCTCGCTGCCTGC 3125040 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | ||| || | ||||| || |||||||| |||||||| ||||||||||| Sbjct 3125039 TC-GTGGCAGCGCCCGCATCTTATCGTCCTTGACGAGCCGACCAACTACCTGGACCGCGA 3124981 Query 280823 GAGCCTGGGCGCTCTG 280838 ||| || || ||| Sbjct 3124980 CTCCCTCGGTGCCCTG 3124965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835812313075