Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq5 100 6e-16
seq8 95.1 2e-14
>seq5
Length=10013798
Score = 100 bits (110), Expect = 6e-16
Identities = 142/197 (72%), Gaps = 6/197 (3%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || ||||| || ||||||||||||||||| |||||| | |||||||| || |
Sbjct 7639325 GTCGGATCGCTGTCCGGCGGTTGGAAGATGAAGCTCGCCCTCGCCCGCGCCATGCTGCAA 7639266
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
||||| ||||| ||||| || ||||| ||||||||| | ||| |||||| | ||
Sbjct 7639265 AAGGCCGACGTCCTGCTGCTCGACGAGCCGACCAACCACCTCGACGTGACCAACATTGCG 7639206
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATG---TTTCTTCCCTCATTGTCTCTCAC 279872
||| | | ||| || | || | | | | || | | |||||| ||||| |||
Sbjct 7639205 TGGTTGGAAAACTATCT--CAAGAC-GCACACTGACATCACGAGCCTCATCGTCTCCCAC 7639149
Query 279873 GACTCTGGCTTCCTAGA 279889
||||| |||||||| ||
Sbjct 7639148 GACTCGGGCTTCCTCGA 7639132
Score = 89.7 bits (98), Expect = 1e-12
Identities = 134/188 (71%), Gaps = 2/188 (1%)
Strand=Plus/Minus
Query 280174 TCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCC 280233
|||| || ||||| || || || ||||| || || ||||| | || || |||||||||
Sbjct 7638844 TCATCGGGCCCAACGGCGCCGGCAAGTCGACGCTCATCAAGCTGCTCACGGGCGAGACCA 7638785
Query 280234 AGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAG 280292
| || || ||| | | | |||||| || ||| |||| || | ||| || |||
Sbjct 7638784 TCCCGAC-GACGGGCAAGGTCGAGAAGCACCCGAACCTGCGCATCGGCTACATCAAGCAG 7638726
Query 280293 CACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGG 280352
||||| || | ||| |||||| ||||| || | ||| || ||||| ||| | ||||||
Sbjct 7638725 CACGCCCTCGAGCACGTCGAGATGCACCTCGAGAAGACGCCGAACCAGTACCTGCAGTGG 7638666
Query 280353 CGCTATGC 280360
||||| ||
Sbjct 7638665 CGCTACGC 7638658
>seq8
Length=3860646
Score = 95.1 bits (104), Expect = 2e-14
Identities = 178/258 (69%), Gaps = 8/258 (3%)
Strand=Plus/Minus
Query 279309 GAGGCAAAGGACGAAGCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGAT 279368
||||| ||| ||| || || ||||| ||| || |||||||| || ||||
Sbjct 3126533 GAGGCCGAGGCCGAGGCTGACGAGGAG---GAG---GGCGAGGATCTCTGCAACTGCACC 3126480
Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428
||||| ||||| || |||| ||||||||||| ||| || | ||| | ||||||
Sbjct 3126479 TTCTCCCTCGCCTACGGTGCCAAGATTCTGCTCAACCAGACTCACCTGCGTCTGAAGCGT 3126420
Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488
||| | || || |||||| ||| ||||| || | || ||| ||| || ||||| |||
Sbjct 3126419 GGCCAGCGCTACGGTCTCTGCGGCCCCAACGGTTCCGGCAAGTCCACCCTCATGCGTGCC 3126360
Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGT 279547
|| |||| ||| | | ||| ||||| | ||| ||||| | ||| || | ||
Sbjct 3126359 ATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCAGAGCGAGGTCAAGACCGTCTTCGT 3126301
Query 279548 AGAGCACGACATCGACTC 279565
||||||||| |||||||
Sbjct 3126300 CGAGCACGACCTCGACTC 3126283
Score = 86.0 bits (94), Expect = 1e-11
Identities = 102/136 (75%), Gaps = 2/136 (1%)
Strand=Plus/Minus
Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762
||||| ||||| || ||||| ||||| |||||| ||||| ||| ||| || ||
Sbjct 3125099 CACTCCCGCATGCGTGGTCTGTCTGGTGGCCAGCGTGTCAAGACCGTCCTCGCTGCCTGC 3125040
Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| |||||| | ||| || | ||||| || |||||||| |||||||| |||||||||||
Sbjct 3125039 TC-GTGGCAGCGCCCGCATCTTATCGTCCTTGACGAGCCGACCAACTACCTGGACCGCGA 3124981
Query 280823 GAGCCTGGGCGCTCTG 280838
||| || || |||
Sbjct 3124980 CTCCCTCGGTGCCCTG 3124965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835812313075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |