Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq11 179 7e-40
seq5 154 3e-32
seq8 93.3 8e-14
>seq11
Length=1832425
Score = 179 bits (198), Expect = 7e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||||| || | ||| || ||| ||| || |||||||| || |||
Sbjct 1806832 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1806773
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | |||||| |||||||| ||||| | ||||||||||| ||
Sbjct 1806772 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 1806713
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| || ||||| | ||||||| ||||||||||| | || || ||
Sbjct 1806712 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1806653
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || |||||||||||||||||||| ||||||||
Sbjct 1806652 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606
>seq5
Length=10013798
Score = 154 bits (170), Expect = 3e-32
Identities = 166/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| ||||| ||||| || |||||||| || |||
Sbjct 3224427 CCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224368
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| |||| || || || | |||||| ||||| || ||||| | ||||||||||| ||
Sbjct 3224367 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGG 3224308
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| | |||||| ||||| ||||| | || || ||
Sbjct 3224307 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACC 3224248
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454
|| | ||||||||| || |||||||| |||||||||| ||
Sbjct 3224247 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGACTA 3224208
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| ||||||| ||| | ||||| ||| ||| || |||||||| || |||
Sbjct 3224883 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3224824
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | || || || | |||||| |||||||| || || | || |||||||| ||
Sbjct 3224823 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 3224764
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| |||||||| |||||||| ||| ||| ||||| ||||| | ||||| ||
Sbjct 3224763 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACC 3224704
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || || || || | ||||||||||| ||||||||
Sbjct 3224703 TCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657
Score = 93.3 bits (102), Expect = 8e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020
|||| | ||| ||| || |||||||| | ||||||||| || ||| | || |||||
Sbjct 7638644 GGTCGTCGCCGTTGGCGTAGCGCCACTGCAGGTACTGGTTCGGCGTCTTCTCGAGGTGCA 7638703
Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080
|||| | || | || || ||||| | ||| | ||||||| ||| || ||||||
Sbjct 7638704 TCTCGACGTGCTCGAGGGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTCGGGTGCTTCT 7638763
Query 225081 ACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGC 225140
|| |||| ||||| | |||||| ||||| | |||||||||||| | |||||
Sbjct 7638764 CGACCTTGCCCGTCGTCGGGATGGTCTCGCCCGTGAGCAGCTTGATGAGCGTCGACTTGC 7638823
Query 225141 CCGCACCATTGGGGCCAAT 225159
| || || ||||| || ||
Sbjct 7638824 CGGCGCCGTTGGGCCCGAT 7638842
Score = 93.3 bits (102), Expect = 8e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504
||| |||||||| ||||||||||| || |||| | || | || || | ||||||
Sbjct 7639131 GTCGAGGAAGCCCGAGTCGTGGGAGACGATGAGGCTCGTGATGTCAGTGTGCGTCTTGAG 7639190
Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564
| | | ||| || | |||| | ||||| | |||||| || || ||||| || ||
Sbjct 7639191 ATAGTTTTCCAACCACGCAATGTTGGTCACGTCGAGGTGGTTGGTCGGCTCGTCGAGCAG 7639250
Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624
||||| ||| || | || |||||||| | ||| | |||||||| ||||| || ||
Sbjct 7639251 CAGGACGTCGGCCTTTTGCAGCATGGCGCGGGCGAGGGCGAGCTTCATCTTCCAACCGCC 7639310
Query 225625 GGACAGGGAGCCGA 225638
|||||| || ||||
Sbjct 7639311 GGACAGCGATCCGA 7639324
>seq8
Length=3860646
Score = 93.3 bits (102), Expect = 8e-14
Identities = 440/682 (65%), Gaps = 49/682 (7%)
Strand=Plus/Plus
Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040
|||||||||||||||| | || ||| |||| ||||||| || || ||| ||| ||
Sbjct 3125494 CGCCACTGGATGTACTCGGAAGGCGTCTTGTCGAGGTGGTCATCGATGTGGGCGAAGGCG 3125553
Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099
||||| | ||| || || || ||||| |||| | | | | || || ||
Sbjct 3125554 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTAGGG 3125613
Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159
|| | ||| || || ||||| ||||| ||||| | |||||| ||||| |||||||| ||
Sbjct 3125614 ATGAG-CTCACCCGTCAGGACGTTGATCAGCGTCGACTTGCCGGCACCGTTGGGGCCGAT 3125672
Query 225160 CACGCCAATCCGGGA--TGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217
||| |||| || || || | ||| ||| || | || | | ||||| |||
Sbjct 3125673 GACGGCAATACGAGAGCCGAGAGAGCA--CTGGAAGGAGATGTCGGT---GATCT-GGGG 3125726
Query 225218 CCAGTTTGGTAAGCAAAGGC-CACGCCACGCAGCTTCATGATGGCACG------------ 225264
| || | ||| ||| || | | | | || || |||||||
Sbjct 3125727 C---TTCG--AAGTGCCGGCATACTGGAAGGA-CATCTTGGTGGCACGGAGAATGGCCTT 3125780
Query 225265 GTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGC 225324
| |||||| | | |||||| ||||| |||||||||||||| ||| | || | |
Sbjct 3125781 GGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGA 3125840
Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGG---TCGCTTTGCCACGAAAGCAGACAG 225381
| | || |||||||| || ||| ||| ||||| ||||| | | ||
Sbjct 3125841 GGCACCGAGCTCGTAGTACGACTTGGCCGAGGGAACCCGCTT---GACGAACTCGGCGAG 3125897
Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACA 225440
||| || ||| | ||||||||| | |||||| || || || ||| | ||| |
Sbjct 3125898 GTTACCACGGTAACGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGA 3125953
Query 225441 CTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500
| ||| |||||||| ||||||||||| || |||||||||| | || || |
Sbjct 3125954 CGTTGTCGAGGAAGCCGGAGTCGTGGGAGACGATGATGGACGTGCAGGGCG--AG----T 3126007
Query 225501 TGAGGTG--CGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGT 225557
||| | | || | |||||| ||||| | ||||||| ||||| || || ||||
Sbjct 3126008 TGATGAGATAGTCCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTCGGCTCGT 3126067
Query 225558 CCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCC 225617
| || ||||| ||||| | | || || ||| || || | ||||||||| ||||
Sbjct 3126068 CGAGCAGCAGAATGTCGGGGGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCC 3126127
Query 225618 AGCCCCCGGACAGGGAGCCGAT 225639
| || || || |||| || |||
Sbjct 3126128 AACCACCAGAGAGGGCGCTGAT 3126149
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621535979000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |