Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq11 179 7e-40 seq5 154 3e-32 seq8 93.3 8e-14 >seq11 Length=1832425 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| || ||| ||| || |||||||| || ||| Sbjct 1806832 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1806773 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| |||||||| ||||| | ||||||||||| || Sbjct 1806772 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 1806713 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||||||||| | || || || Sbjct 1806712 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1806653 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || |||||||||||||||||||| |||||||| Sbjct 1806652 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606 >seq5 Length=10013798 Score = 154 bits (170), Expect = 3e-32 Identities = 166/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| ||||| ||||| || |||||||| || ||| Sbjct 3224427 CCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224368 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| ||||| || ||||| | ||||||||||| || Sbjct 3224367 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGG 3224308 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| | |||||| ||||| ||||| | || || || Sbjct 3224307 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACC 3224248 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATA 68454 || | ||||||||| || |||||||| |||||||||| || Sbjct 3224247 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGACTA 3224208 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||||| ||| | ||||| ||| ||| || |||||||| || ||| Sbjct 3224883 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3224824 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || || || | |||||| |||||||| || || | || |||||||| || Sbjct 3224823 AAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGG 3224764 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| |||||||| ||| ||| ||||| ||||| | ||||| || Sbjct 3224763 ATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACC 3224704 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || || || || | ||||||||||| |||||||| Sbjct 3224703 TCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 93.3 bits (102), Expect = 8e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 224961 GGTCCTGGCCTGAGGCATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGT 225020 |||| | ||| ||| || |||||||| | ||||||||| || ||| | || ||||| Sbjct 7638644 GGTCGTCGCCGTTGGCGTAGCGCCACTGCAGGTACTGGTTCGGCGTCTTCTCGAGGTGCA 7638703 Query 225021 TCTCAATATGGTGGAAAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCC 225080 |||| | || | || || ||||| | ||| | ||||||| ||| || |||||| Sbjct 7638704 TCTCGACGTGCTCGAGGGCGTGCTGCTTGATGTAGCCGATGCGCAGGTTCGGGTGCTTCT 7638763 Query 225081 ACACAGAGCCCCGAGTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGC 225140 || |||| ||||| | |||||| ||||| | |||||||||||| | ||||| Sbjct 7638764 CGACCTTGCCCGTCGTCGGGATGGTCTCGCCCGTGAGCAGCTTGATGAGCGTCGACTTGC 7638823 Query 225141 CCGCACCATTGGGGCCAAT 225159 | || || ||||| || || Sbjct 7638824 CGGCGCCGTTGGGCCCGAT 7638842 Score = 93.3 bits (102), Expect = 8e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504 ||| |||||||| ||||||||||| || |||| | || | || || | |||||| Sbjct 7639131 GTCGAGGAAGCCCGAGTCGTGGGAGACGATGAGGCTCGTGATGTCAGTGTGCGTCTTGAG 7639190 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 | | | ||| || | |||| | ||||| | |||||| || || ||||| || || Sbjct 7639191 ATAGTTTTCCAACCACGCAATGTTGGTCACGTCGAGGTGGTTGGTCGGCTCGTCGAGCAG 7639250 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 ||||| ||| || | || |||||||| | ||| | |||||||| ||||| || || Sbjct 7639251 CAGGACGTCGGCCTTTTGCAGCATGGCGCGGGCGAGGGCGAGCTTCATCTTCCAACCGCC 7639310 Query 225625 GGACAGGGAGCCGA 225638 |||||| || |||| Sbjct 7639311 GGACAGCGATCCGA 7639324 >seq8 Length=3860646 Score = 93.3 bits (102), Expect = 8e-14 Identities = 440/682 (65%), Gaps = 49/682 (7%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || ||| |||| ||||||| || || ||| ||| || Sbjct 3125494 CGCCACTGGATGTACTCGGAAGGCGTCTTGTCGAGGTGGTCATCGATGTGGGCGAAGGCG 3125553 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA-CAGAGCCCCGAGTCGG 225099 ||||| | ||| || || || ||||| |||| | | | | || || || Sbjct 3125554 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCCTCGGTAGGG 3125613 Query 225100 TTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAAT 225159 || | ||| || || ||||| ||||| ||||| | |||||| ||||| |||||||| || Sbjct 3125614 ATGAG-CTCACCCGTCAGGACGTTGATCAGCGTCGACTTGCCGGCACCGTTGGGGCCGAT 3125672 Query 225160 CACGCCAATCCGGGA--TGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGG 225217 ||| |||| || || || | ||| ||| || | || | | ||||| ||| Sbjct 3125673 GACGGCAATACGAGAGCCGAGAGAGCA--CTGGAAGGAGATGTCGGT---GATCT-GGGG 3125726 Query 225218 CCAGTTTGGTAAGCAAAGGC-CACGCCACGCAGCTTCATGATGGCACG------------ 225264 | || | ||| ||| || | | | | || || ||||||| Sbjct 3125727 C---TTCG--AAGTGCCGGCATACTGGAAGGA-CATCTTGGTGGCACGGAGAATGGCCTT 3125780 Query 225265 GTCCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGC 225324 | |||||| | | |||||| ||||| |||||||||||||| ||| | || | | Sbjct 3125781 GGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGAGAACTCGATCTCGGA 3125840 Query 225325 GTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGG---TCGCTTTGCCACGAAAGCAGACAG 225381 | | || |||||||| || ||| ||| ||||| ||||| | | || Sbjct 3125841 GGCACCGAGCTCGTAGTACGACTTGGCCGAGGGAACCCGCTT---GACGAACTCGGCGAG 3125897 Query 225382 GTTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACA 225440 ||| || ||| | ||||||||| | |||||| || || || ||| | ||| | Sbjct 3125898 GTTACCACGGTAACGCTTGAGCTTGAAG---CGCTCGTAGTGGACGATGTGCTG-GCAGA 3125953 Query 225441 CTGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCT 225500 | ||| |||||||| ||||||||||| || |||||||||| | || || | Sbjct 3125954 CGTTGTCGAGGAAGCCGGAGTCGTGGGAGACGATGATGGACGTGCAGGGCG--AG----T 3126007 Query 225501 TGAGGTG--CGTGAT-GAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGT 225557 ||| | | || | |||||| ||||| | ||||||| ||||| || || |||| Sbjct 3126008 TGATGAGATAGTCCTCGAGCCACTTGACGTTCTTCACGTCCAAATGGTTGGTCGGCTCGT 3126067 Query 225558 CCAGAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCC 225617 | || ||||| ||||| | | || || ||| || || | ||||||||| |||| Sbjct 3126068 CGAGCAGCAGAATGTCGGGGGCCTCGAAGACGGCACGGCACAGGGCCAGCTTCATCTTCC 3126127 Query 225618 AGCCCCCGGACAGGGAGCCGAT 225639 | || || || |||| || ||| Sbjct 3126128 AACCACCAGAGAGGGCGCTGAT 3126149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621535979000