Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5 657 0.0 seq2 217 3e-51 >seq5 Length=10013798 Score = 657 bits (728), Expect = 0.0 Identities = 1309/1912 (68%), Gaps = 55/1912 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| ||| ||||||| | |||| ||||||||||||||| |||||| Sbjct 2424382 ACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATGCCCGTCTTG 2424441 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| || | ||||||| ||| | ||| ||| | ||| Sbjct 2424442 AGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTC------GGG 2424495 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTC 243915 || | | | ||| | ||||| |||||| |||||||| ||||| |||| || || Sbjct 2424496 TCCTTCATGT---GAATG---TTGAGCGACTGGGACTGGTCGATGAAGG-CGCCGCGGTC 2424548 Query 243916 TGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTT 243975 || ||||| | | | | ||| || ||||| | |||||||||||| || ||| Sbjct 2424549 GGCCGCCATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTT 2424608 Query 243976 GAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGT 244035 || || | |||| | |||||||| | ||| || || | |||||| || | Sbjct 2424609 GATGTCGGCCGGGATGTTGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTT 2424668 Query 244036 GCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCAC 244095 ||| ||| ||| || |||| | | || ||| || ||| ||| || Sbjct 2424669 CTTCATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGAC 2424728 Query 244096 CACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGAT 244155 |||||| ||||| || | || |||||||||||||||| |||| || |||||||| Sbjct 2424729 CACCTGGAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAA 2424788 Query 244156 GCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAG 244215 || ||| |||||||||| ||||||| |||||| || |||||||| |||| | |||||| Sbjct 2424789 GCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAG 2424848 Query 244216 ACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACATGCC 244275 ||||| | | ||||||| || ||| || || || | ||| | || || Sbjct 2424849 GCTGTTGCGGATGCCGTGCTCCTTGAT-------CTCGGCGCGCAGC-GTCTCCCACTCC 2424900 Query 244276 CGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT-GCTGACGG 244334 | |||||||| | |||| | ||||||||| ||||| || | |||| | | ||| Sbjct 2424901 C-AGAGGTCCGACGGCTTGACGTTCCACATGTCGAACTGGAGGATGCCCTCCGAGGCCGG 2424959 Query 244335 GGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG-CTCTCGTC 244392 | | ||||| |||||| ||| || || | || || ||||| || | ||| |||| Sbjct 2424960 CGAT-CCCTCAAAGGTCGAGTACGGGCCCTGCTCCTTGGACAGCTCGACCGACTC-CGTC 2425017 Query 244393 GAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCA 244452 ||||| |||| ||||||||||||||||||| |||||||| ||||| |||| | | | Sbjct 2425018 -AGGGCCGCGTGGTAGATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGCGCCTCGGGGGA 2425076 Query 244453 GGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGAT 244512 |||||| |||| || | | |||| ||||||| || ||||| ||||||| |||||| Sbjct 2425077 CTCGAAGGGCATGCGCAGCGCGAGGAAGGCGTCGGCGAGGCCCTGGACGCCGACGCCGAT 2425136 Query 244513 GGGTCTGTGTCGC---TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTC 244569 ||||| ||| || ||| || |||| || || | |||||||| |||| |||| Sbjct 2425137 GGGTCGGTGGCGGAAGTTGCTGTTGCGC---GCCTCCTGGACGGGGTAGTGGTTGACGTC 2425193 Query 244570 GATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTC 244629 ||| | ||||||||||||| || | ||| || ||| |||| || ||||| Sbjct 2425194 GATGATGCGGTTGAGGTTGCGGACGACGACGCGCGTCACCTCGTGCAGCTTCTTGAAGTC 2425253 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||| | || ||||| | || || ||||| | ||||||| || Sbjct 2425254 GTA---GCAGC---CCTCG----TTGTAGTCG--ACAAAGGCCGGCAGGGCGAGCGACGC 2425301 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 |||||||||||||||||||| || | | ||||| || ||||||||||| ||||| Sbjct 2425302 GAGGTTGCAGACGGCCACCTCGTCGGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTT 2425361 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || ||| || || |||| || || ||| |||| |||||| ||||||||||| Sbjct 2425362 GGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGTA 2425421 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 ||||||||||| || ||||| |||||| |||||| || |||||| | | Sbjct 2425422 CAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTG 2425481 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 || ||||||| |||| | |||||| |||||| |||||| |||||||| Sbjct 2425482 GGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAA 2425541 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTC 244989 |||| ||| || ||| | |||||||||||| ||||||||||| |||| || Sbjct 2425542 CTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTC 2425601 Query 244990 GCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTC 245049 |||| | || ||| | || |||||||||||||||||||||||| || |||| ||||| Sbjct 2425602 GCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGTC 2425661 Query 245050 CCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTC 245109 | | | | ||| ||| ||| |||||| | ||| || | ||| ||||| ||||| Sbjct 2425662 GCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAAACGTC 2425721 Query 245110 GACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTC 245169 | ||||||| || |||| ||||| |||| |||||| |||||||||||||| |||||||| Sbjct 2425722 GGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGTC 2425781 Query 245170 CACCATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCC 245229 || || | |||||||| ||| || | ||| |||||||| ||| || Sbjct 2425782 GACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACC 2425841 Query 245230 GTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAGTCC 245289 ||||||||| ||||||| || || | | || | | |||| | ||| | || Sbjct 2425842 GTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCC 2425901 Query 245290 GCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCT 245349 |||||| ||||||||| | |||||| |||||| ||||| |||||||| ||||| Sbjct 2425902 GCCGGCCATCTTGGAGATCATGGCGCACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCT 2425961 Query 245350 GTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTT 245409 ||| |||||||| || || ||||| || |||||||| | || || ||| | ||| Sbjct 2425962 GTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGTT 2426021 Query 245410 GAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA- 245468 ||| || || || |||||| || || |||||| | || |||||||| || Sbjct 2426022 GAAGAGCGTCGGCGAGGCGTGCGTGAACATCTTGCTCGACATGAGATTGTACGTCTCGAT 2426081 Query 245469 GCAGAGCGTCGATGTTGTCGCCGTGGATCTGCAGGGCG-CAC-CTCATGAGGGTGTGCTG 245526 | | || |||||||||||||| || ||| | || ||| | ||||| ||||||| Sbjct 2426082 GACGCGC-TCGATGTTGTCGCCCCAGA--TGCCGACCGACACGCGCATGATCATGTGCTG 2426138 Query 245527 GGGCGTCTCGATGGGTCCCTCGGGT-CCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGA 245585 || ||||| | || | | | |||||| | |||||| |||||||| ||||||| Sbjct 2426139 CGGTCGCTCGA-CGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCTCGAGAGTCTTGA 2426197 Query 245586 ACCCAAAGTACGAGTAGCCAAAGTCGGCGTGGTGCCTGACGGCTGCGTCGAG 245637 | ||||||||| |||| |||||| || || || ||| | |||||| Sbjct 2426198 AGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTCGAG 2426249 >seq2 Length=5461500 Score = 217 bits (240), Expect = 3e-51 Identities = 370/523 (71%), Gaps = 25/523 (5%) Strand=Plus/Plus Query 42633 CCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAAC 42691 || |||||| |||||||| || ||||| || |||||| | || | | | | || Sbjct 1981719 CCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCA-AGACAAGGAGTCCAC 1981777 Query 42692 GTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTT 42751 ||||| | | || || || |||||| |||||||||| |||||||||||| || || || Sbjct 1981778 GTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTT 1981837 Query 42752 CGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACG 42810 |||||| ||||||||||| ||| || ||| || ||||| || || || ||||| |||| Sbjct 1981838 CGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTC-ATGCCTGGTCTGACATTCTCCAACG 1981896 Query 42811 AACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCC 42870 | |||||| | || ||||| || || | || ||||| ||||| || ||| | Sbjct 1981897 AGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGCGTGCCTGTTGCATTCG---C 1981953 Query 42871 ACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGA 42930 |||||| || | || ||| || || | ||||||||| || ||||| | Sbjct 1981954 ACCTCAACAACCGGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCA 1982013 Query 42931 TCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAA--CCACG 42987 | ||| ||||||||||||| || | || ||| ||| | ||| |||||||||| |||| Sbjct 1982014 TTGAGCAGGAGTTCCTCACCGAGGCCCT-CCCATGTGCTCTGCTCGGCATGAATGCCAC- 1982071 Query 42988 ACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCA 43047 | | ||| |||||||| ||| ||| ||||| | |||||| || | | |||| Sbjct 1982072 -CTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT-TG-----TTGCTCTCG 1982124 Query 43048 GC--CG----CCTCTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGG 43101 || || | ||||| || || |||||||||||| |||||||||||||| | | Sbjct 1982125 GCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGAACATCTCCCTCG 1982184 Query 43102 AGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144 ||||||||||| || |||||||| || || |||||||| || Sbjct 1982185 GTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCA 1982227 Score = 100 bits (110), Expect = 5e-16 Identities = 224/333 (67%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| ||||| ||||| || || Sbjct 1981312 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 1981371 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAG---TTTTTCCTCAA 42415 ||||||| | || |||| | || || ||| |||| || | |||| || Sbjct 1981372 TCCAAGGATTTGCACGACTGGAACA-ACCGTTTGAATGACGATGAGCGGTATTTCGTCTC 1981430 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || ||||||||||| || ||||| || ||||| |||||||| | | | Sbjct 1981431 GCACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACG 1981490 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| |||||||| | ||||| |||||||||||||| ||||| || || Sbjct 1981491 TTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGAT 1981550 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 || || | ||||| ||| ||| | || || || |||||||| ||| | || Sbjct 1981551 GGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGAGCACGC 1981610 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGAC 42628 |||| | |||||||| ||||| || || Sbjct 1981611 TCAGCGAGAGTATCTGTTCAACGCCATTGACAC 1981643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338314682000