Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq11 134 3e-26 seq5 122 2e-22 >seq11 Length=1832425 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| || | ||||| || || ||||| || |||||| Sbjct 1806832 CCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 1806773 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| || |||||||| ||| Sbjct 1806772 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGG 1806713 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 1806712 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1806653 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||| || || ||||||||||| |||||||| Sbjct 1806652 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606 >seq5 Length=10013798 Score = 122 bits (134), Expect = 2e-22 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || || ||||| || | ||||| ||||| | ||||| || || ||||| || |||||| Sbjct 3224886 TGGCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 3224827 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || || ||||| || | || || || ||||| ||||| ||||| || Sbjct 3224826 CTCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGC 3224767 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| || || || ||||| || || ||| || ||||| || || | || |||||| Sbjct 3224766 GGGATGCCCTCCTTGTCCTGAATCTT-GCTCTTTACGTTGTCGATTGTGTCCGACGATTC 3224708 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | |||||||||||| ||||||| ||||||||||| |||||||| Sbjct 3224707 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 104 bits (114), Expect = 6e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||||||||| | || ||||| || | ||| || || ||||| || |||| Sbjct 3224659 CATG-CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGT 3224601 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 || || || || ||||| || | || || || || ||||| || || || || | Sbjct 3224600 CGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAG 3224541 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| || || || |||||||| |||| || || || || || | || ||| | Sbjct 3224540 GCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACT 3224481 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||| ||||| || || || |||||||| || || ||||| Sbjct 3224480 CCACCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653266425850