Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq5 140 5e-28
seq2 122 1e-22
>seq5
Length=10013798
Score = 140 bits (154), Expect = 5e-28
Identities = 332/494 (67%), Gaps = 6/494 (1%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897
|| ||| || |||||||| |||| |||| ||| ||| || ||| ||||||||||
Sbjct 2424375 CTGGTCGACGGTGAACTGGATGGGCGCGGCGGC-GGCTTGCGTCCGCAGGTAGTACATGC 2424433
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| ||||| || ||| ||| | ||||||| | | |||| || | | |
Sbjct 2424434 CCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTCG 2424493
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
|||| |||||||||||| || |||||| ||||||||| |||||||| || || ||
Sbjct 2424494 GGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATG-AAGGCGCCGCGGTCGGCC 2424552
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | | | ||||||||||||||| ||||||||| | | | | || ||
Sbjct 2424553 GCCATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTTGATG 2424612
Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| || | | | | | || || |||||| ||||| || || || | | || |
Sbjct 2424613 TCGGCCGGGATGT-TGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTTCTT 2424671
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| || | || ||| | |||| || || ||| | ||| |||||||| |
Sbjct 2424672 CATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCAC 2424731
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || |||| || || | || | | | |||| ||| | || |||||
Sbjct 2424732 CTGGAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCA 2424791
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||||||| | ||||| | ||||||||||| ||||| || || || ||||||
Sbjct 2424792 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCT 2424851
Query 204316 GTTGCGCACACCGT 204329
|||||| | ||||
Sbjct 2424852 GTTGCGGATGCCGT 2424865
>seq2
Length=5461500
Score = 122 bits (134), Expect = 1e-22
Identities = 332/500 (66%), Gaps = 15/500 (3%)
Strand=Plus/Minus
Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709
|||||||| || ||||||||||| | | ||| || |||||||| |||| ||||||
Sbjct 1982209 TTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTC 1982150
Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769
| | || |||| |||||||| | || | | || || || || |||
Sbjct 1982149 GACGATTTGTACACCTTCTCGTTGCCGAGAGCAACAAGGAGACGATCGGCAACGAACTCG 1982090
Query 159770 ATGTAGCTACA-CATCT-GCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827
||||| || | |||| | | || || || || ||||| | ||||| || || |
Sbjct 1982089 ATGTA-CTGCTTCATCAAGGTGGCA-TTCATGCCGAGCAGAGCACATGGGAGGGCCTCGG 1982032
Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTAC 159886
|| ||||||| |||||| ||| || ||||| | || | || || ||| | |
Sbjct 1982031 TGAGGAACTCCTGCTCAATGGTGACGGCGTCGGTGATGATGTCGTTGATGACCTTCTTGC 1981972
Query 159887 ---CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943
||||| ||| || ||| | | || ||||||||||| ||| ||| ||
Sbjct 1981971 TGGCCCGG-TTGT------TGAGGTGCGAATGCAACAGGCACGCAAAATCGGTGTGAAGA 1981919
Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003
||||| || || ||||||| ||||||||| | | || || ||||||| || |||
Sbjct 1981918 CCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTC 1981859
Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063
|| ||||| || || | || ||||||||||| || ||||| || || ||||| |||||
Sbjct 1981858 TTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAG 1981799
Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123
|| || || || | | || | || | |||| ||| |||| | |||||| |||
Sbjct 1981798 GCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCA 1981739
Query 160124 GCCTTCTTTGCGATGCACGG 160143
|||||||| |||||| ||
Sbjct 1981738 GCCTTCTTGCGGATGCAAGG 1981719
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154454542000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |