Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5 140 5e-28 seq2 122 1e-22 >seq5 Length=10013798 Score = 140 bits (154), Expect = 5e-28 Identities = 332/494 (67%), Gaps = 6/494 (1%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || |||||||| |||| |||| ||| ||| || ||| |||||||||| Sbjct 2424375 CTGGTCGACGGTGAACTGGATGGGCGCGGCGGC-GGCTTGCGTCCGCAGGTAGTACATGC 2424433 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 | ||||| ||||| || ||| ||| | ||||||| | | |||| || | | | Sbjct 2424434 CCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTCG 2424493 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 |||| |||||||||||| || |||||| ||||||||| |||||||| || || || Sbjct 2424494 GGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATG-AAGGCGCCGCGGTCGGCC 2424552 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | | | ||||||||||||||| ||||||||| | | | | || || Sbjct 2424553 GCCATCTGCACCACCTGCCGCTGCGAAATCTCCCAGACCGTCTTGTAGAGGGCCTTGATG 2424612 Query 204077 TGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | || | | | | | || || |||||| ||||| || || || | | || | Sbjct 2424613 TCGGCCGGGATGT-TGGCAATGTTCTGGATCGACCCGTTCTCCGCGATGATGCGGTTCTT 2424671 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | || | || ||| | |||| || || ||| | ||| |||||||| | Sbjct 2424672 CATCGCGTCGGACCAGAGTCCCATGTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCAC 2424731 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || |||| || || | || | | | |||| ||| | || ||||| Sbjct 2424732 CTGGAACTCGCCGGCGAGGACGCGGCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCA 2424791 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||||||||| | ||||| | ||||||||||| ||||| || || || |||||| Sbjct 2424792 CTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCT 2424851 Query 204316 GTTGCGCACACCGT 204329 |||||| | |||| Sbjct 2424852 GTTGCGGATGCCGT 2424865 >seq2 Length=5461500 Score = 122 bits (134), Expect = 1e-22 Identities = 332/500 (66%), Gaps = 15/500 (3%) Strand=Plus/Minus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| || ||||||||||| | | ||| || |||||||| |||| |||||| Sbjct 1982209 TTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTC 1982150 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | || |||| |||||||| | || | | || || || || ||| Sbjct 1982149 GACGATTTGTACACCTTCTCGTTGCCGAGAGCAACAAGGAGACGATCGGCAACGAACTCG 1982090 Query 159770 ATGTAGCTACA-CATCT-GCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 ||||| || | |||| | | || || || || ||||| | ||||| || || | Sbjct 1982089 ATGTA-CTGCTTCATCAAGGTGGCA-TTCATGCCGAGCAGAGCACATGGGAGGGCCTCGG 1982032 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGAC-ACGTTCGTAC 159886 || ||||||| |||||| ||| || ||||| | || | || || ||| | | Sbjct 1982031 TGAGGAACTCCTGCTCAATGGTGACGGCGTCGGTGATGATGTCGTTGATGACCTTCTTGC 1981972 Query 159887 ---CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 ||||| ||| || ||| | | || ||||||||||| ||| ||| || Sbjct 1981971 TGGCCCGG-TTGT------TGAGGTGCGAATGCAACAGGCACGCAAAATCGGTGTGAAGA 1981919 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 ||||| || || ||||||| ||||||||| | | || || ||||||| || ||| Sbjct 1981918 CCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTC 1981859 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAAC 160063 || ||||| || || | || ||||||||||| || ||||| || || ||||| ||||| Sbjct 1981858 TTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAG 1981799 Query 160064 GCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCA 160123 || || || || | | || | || | |||| ||| |||| | |||||| ||| Sbjct 1981798 GCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCA 1981739 Query 160124 GCCTTCTTTGCGATGCACGG 160143 |||||||| |||||| || Sbjct 1981738 GCCTTCTTGCGGATGCAAGG 1981719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154454542000