Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq5 129 1e-24 seq11 123 6e-23 >seq5 Length=10013798 Score = 129 bits (142), Expect = 1e-24 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| |||||||| ||||||||||| |||| |||||| || | ||| ||| Sbjct 3224129 CGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTC 3224070 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| |||||||| || || ||||||||||| ||| || || Sbjct 3224069 CGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCC 3224010 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| ||||| | | || || || | | Sbjct 3224009 TCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGC 3223950 Query 199589 GTGATCGTCTTACCCGTGA 199607 ||||| ||||| ||||||| Sbjct 3223949 GTGATGGTCTTGCCCGTGA 3223931 Score = 122 bits (134), Expect = 2e-22 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| || |||| || || Sbjct 3224412 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224353 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| |||||||| ||||| ||||| ||| || || || ||| Sbjct 3224352 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 3224293 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || |||| ||||| | | || || || | ||||| ||| Sbjct 3224292 TGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 3224233 Query 199598 TTACCCGTGAGAGTTTTCAC 199617 || |||||||| || || || Sbjct 3224232 TTGCCCGTGAGTGTCTTGAC 3224213 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||| ||||||||||| |||| ||||||||| || |||| || || Sbjct 3224640 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224581 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| |||||||| || |||||||| || || || || ||| Sbjct 3224580 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 3224521 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||||| | | || || || | ||||| ||| Sbjct 3224520 TGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTC 3224461 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || ||||| ||||| Sbjct 3224460 TTTCCAGTGAGCGTCTTGACAAAGATTTG 3224432 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| ||||| || ||||| |||||| |||| ||||||||| ||| || Sbjct 3224877 CGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTA 3224818 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || || |||||||| |||||||| || || ||||||||||| || || || Sbjct 3224817 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCC 3224758 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||| ||| |||| ||||| | | ||| || |||||| Sbjct 3224757 TCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAAC 3224698 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || | || || || || || || Sbjct 3224697 GTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTG 3224660 >seq11 Length=1832425 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || || |||||| |||| ||||||||| || || Sbjct 1806826 CGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTG 1806767 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| |||||||||||||| ||||| ||||| || || || Sbjct 1806766 CGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCC 1806707 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| |||||| | | || || || | Sbjct 1806706 TCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGG 1806647 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| |||||||| || || || ||||| || Sbjct 1806646 GTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTG 1806609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920467130025