Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq5 161 1e-34
seq11 143 3e-29
seq1 84.2 2e-11
>seq5
Length=10013798
Score = 161 bits (178), Expect = 1e-34
Identities = 167/216 (77%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||||| ||||| ||||||||| | || || ||
Sbjct 3224871 CGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCG 3224812
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| |||| |||||||||||||| ||| | || |||||||
Sbjct 3224811 TCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTG 3224752
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| ||||| |||| | ||| | | | ||||| ||||||||| |||| ||||||
Sbjct 3224751 TCCTGAATCTTGCTCTTTA-CGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGAT 3224693
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| |||| ||| || || ||||| |||||
Sbjct 3224692 CGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657
Score = 134 bits (148), Expect = 2e-26
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || || || |||| ||||||||||||||||| ||
Sbjct 3224620 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 3224561
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||| |||||||| | ||| | || |||||||||| ||||||| ||| | |
Sbjct 3224560 GATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATT 3224501
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| ||| ||||| || | |||||||| || || || ||||| || ||
Sbjct 3224500 ATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGAC 3224441
Query 46582 AAAGATTTGCAT 46593
||||||||||||
Sbjct 3224440 AAAGATTTGCAT 3224429
Score = 132 bits (146), Expect = 5e-26
Identities = 130/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| ||||| | || || | || ||||||||||||||||||||
Sbjct 3224100 CTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAA 3224041
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||||| || | || |||||||||| ||||||| ||||| |
Sbjct 3224040 AATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTTGACATT 3223981
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | |||||| ||| || || || | ||||||||| ||||||||
Sbjct 3223980 GTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCCGT 3223933
Score = 118 bits (130), Expect = 1e-21
Identities = 134/180 (74%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| || || || |||| ||||||||||||||||| ||
Sbjct 3224392 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 3224333
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||| ||||||| || | || |||||||||| |||||| ||||| |
Sbjct 3224332 GATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGACTTGACATT 3224273
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || ||||| || | |||||||| |||||||| || || || ||
Sbjct 3224272 GTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGAC 3224213
>seq11
Length=1832425
Score = 143 bits (158), Expect = 3e-29
Identities = 166/221 (75%), Gaps = 2/221 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| ||| || |||| || |||||||| ||||| ||||||||| || ||||| |
Sbjct 1806820 CGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCA 1806761
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| |||||||||||||||||||| || | |||||| ||||||| || | || |||||||
Sbjct 1806760 TCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTG 1806701
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 1806700 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 1806642
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|| || ||||| || || || || || || ||||| ||||
Sbjct 1806641 CGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGC 1806601
>seq1
Length=2797149
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || | ||| || | || ||||||||||| || || || |
Sbjct 1553027 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 1553086
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
|||| | ||||| || | || | || |||||||||| |||||| ||||| |
Sbjct 1553087 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1553146
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||| || || || || | ||| || || |||||||| || || || || |
Sbjct 1553147 CGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGA 1553206
Query 46584 A 46584
|
Sbjct 1553207 A 1553207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237870089000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |