Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq2 161 1e-34 seq11 143 3e-29 seq5 129 6e-25 >seq2 Length=5461500 Score = 161 bits (178), Expect = 1e-34 Identities = 347/507 (68%), Gaps = 20/507 (4%) Strand=Plus/Minus Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663 |||||||| ||| | || |||||| || ||||| || || || | | ||| ||| | Sbjct 1982230 TTTTGATAGTCGGCAACACGTTTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTC 1982171 Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720 ||| || || |||||||| | | ||||| ||| | |||||| || | || Sbjct 1982170 TCCATGAAGTCGAAGGGGTTCGACGATTTGTACACCTTCTCGTTGCCGAG-AG--CAACA 1982114 Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777 || || | ||||| |||||||||||||| ||| ||| ||| | ||| | || Sbjct 1982113 AGGAGACGATCGGCAACGAACTCGATGTACTGCTTCATCAAGGT---GGCATTCATGCCG 1982057 Query 132778 AGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 |||||| |||| || || || |||||||| || ||||| |||| ||| |||||||| Sbjct 1982056 AGCAGA-GCACATGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATGGTGACGGCGTCGGT 1981998 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA--CATCAAG 132894 || ||| || | | | | | ||| | ||| | | ||| ||| || || | Sbjct 1981997 GATGATGTCGTTGATGACCTTCTTGCTGGCCCGGTTGTTGAGGTGC--GAATGCAACAGG 1981940 Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||| ||| || | ||||| || | || ||||| |||||| ||| |||| Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || |||||||| ||||| || || ||||| || || | ||||||| || |||||| Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGC 133073 | ||| |||||||| || || || || || | | | ||||||||| || ||| || | Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTG- 1981761 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100 |||||| ||||| ||||| || ||||| Sbjct 1981760 GATCCAACGCAGGGCCCAATCAGCCTT 1981734 Score = 145 bits (160), Expect = 8e-30 Identities = 198/276 (72%), Gaps = 3/276 (1%) Strand=Plus/Minus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| | |||||| | | ||| || | || ||||| | || ||||| |||||| || Sbjct 1981596 GTACGAGTCGATCAAGAGCGAGTAGGTCTCGGAGTGGATATTTTCCATCATGATTTGGAA 1981537 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||||| ||||| || |||||| | ||||| || |||||| ||||| || || Sbjct 1981536 ACCGTAGAAGCAGCGAGCCTCGGGGATTTGCACCTCGCCGCTGAAACGTTCGACAAGGTT 1981477 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 ||||||||||| ||||| |||||||| || || || | |||| || ||||| || Sbjct 1981476 CTCGTTGACGATTCCGTCCGAAGCGGCGAAGAAAGCGAGAATGTGCGAGACGAAATACCG 1981417 Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| | ||| ||||| || | ||||||| || |||||||| || || | ||| || Sbjct 1981416 CTCATCGTCATTCAAACGGTTGTTCCAGTCGTGCAAATCCTTGGAAAGATCGATCTCTTC 1981357 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||| || ||||||||||| || |||||||| Sbjct 1981356 GGCCGTCCAGAAGGACGCCTCGGCCTTCTTGTACAT 1981321 >seq11 Length=1832425 Score = 143 bits (158), Expect = 3e-29 Identities = 167/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 1806603 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1806662 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| |||| Sbjct 1806663 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1806721 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||||||||| ||||| | ||| ||||| ||||| || || | |||||||| | |||||| Sbjct 1806722 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTA 1806781 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458 ||||||||| ||||| ||| || ||||| | |||||||| Sbjct 1806782 CAACATCCAGAAGGAGAGC-ACCCTGCACCTCGTGCTGCG 1806820 >seq5 Length=10013798 Score = 129 bits (142), Expect = 6e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310 || |||| || || ||||||||||| ||||||||| |||| || ||| | | |||| Sbjct 3224208 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGA 3224267 Query 38311 TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | | | | || || || | ||||| ||||| || || ||||||||||||| | Sbjct 3224268 TCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCC 3224327 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 |||| | || ||||| ||||| || |||| || ||||| | ||||||||||||||| | Sbjct 3224328 TCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGA 3224387 Query 38431 AGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||| ||||||| || | || || ||| || | |||||| Sbjct 3224388 AGGAGTCGACGCTCCACCTCGTCCTTCGTCTGCGTGGCGGC 3224428 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || |||||||| || || ||||||||| |||| || ||| | | Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362 |||| | | | |||| || |||| ||||| ||||| || |||||| ||||| Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACCA 3224547 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || ||||| | || ||||| ||||| || |||| || ||||| | ||||||||| Sbjct 3224548 GCAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAA 3224607 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| ||||||| || | || || ||| Sbjct 3224608 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGT 3224644 Score = 113 bits (124), Expect = 5e-20 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| || ||||| | || || || | | Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| |||||| || || | ||||| ||||| || || |||||| Sbjct 3224717 GACACAATCGACAACG--TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 3224774 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || |||| ||| ||||| ||||| || |||| || ||| | | |||||||| Sbjct 3224775 AGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACA 3224834 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||||| ||||| ||| || || ||| | || ||||| || | ||||||| Sbjct 3224835 ACATCCAGAAGGAGAGC-ACTCTACATCTTGTACTGCGCCTGCGCGGCGGCC 3224885 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325 |||||||||| |||||||| | || |||||| | | |||| | | | | || Sbjct 3223931 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 3223990 Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || |||| ||||| ||||| || || ||||||| ||||| || |||| ||| |||| Sbjct 3223991 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 3224050 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 | ||||| || || | || ||| | ||| ||||||||||| ||||| ||||||| | Sbjct 3224051 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 3224110 Query 38446 A 38446 | Sbjct 3224111 A 3224111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172331088000