Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq2 161 1e-34
seq11 143 3e-29
seq5 129 6e-25
>seq2
Length=5461500
Score = 161 bits (178), Expect = 1e-34
Identities = 347/507 (68%), Gaps = 20/507 (4%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|||||||| ||| | || |||||| || ||||| || || || | | ||| ||| |
Sbjct 1982230 TTTTGATAGTCGGCAACACGTTTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTC 1982171
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||| | | ||||| ||| | |||||| || | ||
Sbjct 1982170 TCCATGAAGTCGAAGGGGTTCGACGATTTGTACACCTTCTCGTTGCCGAG-AG--CAACA 1982114
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACAT---GGTTTCGCAATTAAGTCCC 132777
|| || | ||||| |||||||||||||| ||| ||| ||| | ||| | ||
Sbjct 1982113 AGGAGACGATCGGCAACGAACTCGATGTACTGCTTCATCAAGGT---GGCATTCATGCCG 1982057
Query 132778 AGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836
|||||| |||| || || || |||||||| || ||||| |||| ||| ||||||||
Sbjct 1982056 AGCAGA-GCACATGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATGGTGACGGCGTCGGT 1981998
Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA--CATCAAG 132894
|| ||| || | | | | | ||| | ||| | | ||| ||| || || |
Sbjct 1981997 GATGATGTCGTTGATGACCTTCTTGCTGGCCCGGTTGTTGAGGTGC--GAATGCAACAGG 1981940
Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954
|| ||||| ||| || | ||||| || | || ||||| |||||| ||| ||||
Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880
Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014
|| |||||||| ||||| || || ||||| || || | ||||||| || ||||||
Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820
Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG-CTTCTTTGCTGGC 133073
| ||| |||||||| || || || || || | | | ||||||||| || ||| || |
Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTG- 1981761
Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTT 133100
|||||| ||||| ||||| || |||||
Sbjct 1981760 GATCCAACGCAGGGCCCAATCAGCCTT 1981734
Score = 145 bits (160), Expect = 8e-30
Identities = 198/276 (72%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||| | |||||| | | ||| || | || ||||| | || ||||| |||||| ||
Sbjct 1981596 GTACGAGTCGATCAAGAGCGAGTAGGTCTCGGAGTGGATATTTTCCATCATGATTTGGAA 1981537
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
||||| ||||| || |||||| | ||||| || |||||| ||||| || ||
Sbjct 1981536 ACCGTAGAAGCAGCGAGCCTCGGGGATTTGCACCTCGCCGCTGAAACGTTCGACAAGGTT 1981477
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
||||||||||| ||||| |||||||| || || || | |||| || ||||| ||
Sbjct 1981476 CTCGTTGACGATTCCGTCCGAAGCGGCGAAGAAAGCGAGAATGTGCGAGACGAAATACCG 1981417
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||| | ||| ||||| || | ||||||| || |||||||| || || | ||| ||
Sbjct 1981416 CTCATCGTCATTCAAACGGTTGTTCCAGTCGTGCAAATCCTTGGAAAGATCGATCTCTTC 1981357
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| || ||||||||||| || ||||||||
Sbjct 1981356 GGCCGTCCAGAAGGACGCCTCGGCCTTCTTGTACAT 1981321
>seq11
Length=1832425
Score = 143 bits (158), Expect = 3e-29
Identities = 167/220 (76%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| | || || ||| |
Sbjct 1806603 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 1806662
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| || ||| ||||
Sbjct 1806663 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 1806721
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||||||||| ||||| | ||| ||||| ||||| || || | |||||||| | ||||||
Sbjct 1806722 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTA 1806781
Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCG 38458
||||||||| ||||| ||| || ||||| | ||||||||
Sbjct 1806782 CAACATCCAGAAGGAGAGC-ACCCTGCACCTCGTGCTGCG 1806820
>seq5
Length=10013798
Score = 129 bits (142), Expect = 6e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 38251 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCG 38310
|| |||| || || ||||||||||| ||||||||| |||| || ||| | | ||||
Sbjct 3224208 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGA 3224267
Query 38311 TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| | | | || || || | ||||| ||||| || || ||||||||||||| |
Sbjct 3224268 TCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCC 3224327
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
|||| | || ||||| ||||| || |||| || ||||| | ||||||||||||||| |
Sbjct 3224328 TCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGA 3224387
Query 38431 AGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||| ||||||| || | || || ||| || | ||||||
Sbjct 3224388 AGGAGTCGACGCTCCACCTCGTCCTTCGTCTGCGTGGCGGC 3224428
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || || |||||||| || || ||||||||| |||| || ||| | |
Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | |||| || |||| ||||| ||||| || |||||| |||||
Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACCA 3224547
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | || ||||| ||||| || |||| || ||||| | |||||||||
Sbjct 3224548 GCAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAA 3224607
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| ||||| ||||||| || | || || |||
Sbjct 3224608 CATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGT 3224644
Score = 113 bits (124), Expect = 5e-20
Identities = 168/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||| | || ||||| || ||||| | || || || | |
Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | |||| |||||| || || | ||||| ||||| || || ||||||
Sbjct 3224717 GACACAATCGACAACG--TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACC 3224774
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || |||| ||| ||||| ||||| || |||| || ||| | | ||||||||
Sbjct 3224775 AGCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACA 3224834
Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||| ||||| ||| || || ||| | || ||||| || | |||||||
Sbjct 3224835 ACATCCAGAAGGAGAGC-ACTCTACATCTTGTACTGCGCCTGCGCGGCGGCC 3224885
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAAACGCTTAAAG 38325
|||||||||| |||||||| | || |||||| | | |||| | | | | ||
Sbjct 3223931 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 3223990
Query 38326 AAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385
|| |||| ||||| ||||| || || ||||||| ||||| || |||| ||| ||||
Sbjct 3223991 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 3224050
Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445
| ||||| || || | || ||| | ||| ||||||||||| ||||| ||||||| |
Sbjct 3224051 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 3224110
Query 38446 A 38446
|
Sbjct 3224111 A 3224111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172331088000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |