Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 149 8e-31 seq2 96.9 4e-15 >seq5 Length=10013798 Score = 149 bits (164), Expect = 8e-31 Identities = 555/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| || || |||| ||| || || | || || || Sbjct 2426141 CCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTC 2426082 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||| | ||||| | ||||||| ||||| | || || |||||| Sbjct 2426081 ATCGAGACGTACAATCTCATGTCGAGCAAGATGTTCACGCACGCCTCGCCGACGCTCTTC 2426022 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || |||| || ||||| | | | ||||| || Sbjct 2426021 AACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACGAC 2425962 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | ||||| |||| ||| |||| || ||| ||||| ||| ||| || Sbjct 2425961 AGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCGGC 2425902 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 || ||||| | ||||||| || | |||| | || ||| || || || Sbjct 2425901 GGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCAAC 2425842 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 ||| || | || || | || ||||||||||| || ||| ||| || || || || Sbjct 2425841 GGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACGTC 2425782 Query 111972 AACCAAGCTGGGCGTCG-CAAG------GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 |||| ||||| | |||| || | |||| |||| || || || ||||| Sbjct 2425781 GACCA----GGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCA 2425726 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 ||| || | | ||||| || || |||| ||||| || | ||||||| ||| Sbjct 2425725 CGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGC 2425666 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 ||||| || ||| ||| |||||||| || || |||||||||||| | || ||| ||| Sbjct 2425665 GCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAA 2425606 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204 ||| | ||| | ||| | || || || || ||||| ||| |||| | || || Sbjct 2425605 CGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGA 2425546 Query 112205 GGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACGGTG 112262 ||||| || || || ||| |||||||||| || | | ||| | || |||||| Sbjct 2425545 CGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCC--GCGGCCGCAAGACGGTC 2425488 Query 112263 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321 | || | || | | ||| | | || ||| || | || || ||||| || | || | Sbjct 2425487 CGCGC-CCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTT 2425429 Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381 ||||| ||||| ||||| || |||| ||||| || || ||||| | || |||| Sbjct 2425428 CATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCG 2425369 Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441 || |||||||| || || || ||| | || | | | || ||| ||| || || Sbjct 2425368 CAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTG 2425309 Query 112442 TAACCTCGCATCAATCGCTCTCCC 112465 |||||||| || |||| || || Sbjct 2425308 CAACCTCGCGTCGCTCGCCCTGCC 2425285 >seq2 Length=5461500 Score = 96.9 bits (106), Expect = 4e-15 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 102108 ACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AG 102164 |||||||| || || | ||||| || |||||||| || ||| | | |||| || Sbjct 1981713 ACAGTTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAG 1981772 Query 102165 TCG-CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTC 102223 || ||||| || | |||| | || ||||| || || || ||||||||| Sbjct 1981773 TCCACGTTC----GCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAG 1981828 Query 102224 TGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 102283 ||| | ||| | | || | ||||| |||||||| ||||||||||| ||||| || Sbjct 1981829 CGGTGCTTTCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATT 1981888 Query 102284 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 |||||||||||| ||||| ||||| ||||| || ||| || |||||| Sbjct 1981889 CTCCAACGAGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGCG 1981937 Score = 89.7 bits (98), Expect = 6e-13 Identities = 273/413 (66%), Gaps = 12/413 (3%) Strand=Plus/Plus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || || || ||||| || || | ||||| | || |||| || ||||||| || || Sbjct 1696350 CGGTCGAAACGACCCGGTCGCATCAGCGCCTTGTCGAGGACGTCGGCGCGATTGGTGCCG 1696409 Query 15945 GCGATGACAACAATACCTGTT-TCGT-TATCAAAACCATCCATCTCTGTCAAAAGCTGGT 16002 || | ||| |||| |||| | ||| | | || || |||||||| || | | ||||| Sbjct 1696410 GCCAAGACGACAA--CCTGCTCTCGCGTGTTGAAGCCGTCCATCTCGGTGAGGATCTGGT 1696467 Query 16003 TAATAGTTTGTTCCCGTTCATCATT-CGCTGGCATAC----CACCAGCACTG-CGTTGCT 16056 | | || ||||| || || || | | | || | | | | ||| ||| | Sbjct 1696468 TGAGGGTCGCCTCCCGCTCGTCGTTGCCCCCGAATCCTCGGCCGCTGTCCTGGCGTGCCC 1696527 Query 16057 TTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTT 16116 |||| | ||| || || || || ||||||| |||||| || ||| | ||| | | Sbjct 1696528 TTCCGATGGCGTCGATTTCGTCGATGAAGATGATGCACGGCGCATTCTTGCGGCCCTCGG 1696587 Query 16117 CAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGG 16176 | || || || || || || || ||| || || || ||||| |||||||| | | | Sbjct 1696588 CGAACAGGTCACGCACGCGAGAGGGGCCAACGCCGACGAACATTTCCACAAACTCGGAGC 1696647 Query 16177 CGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTC 16235 || || || | |||||| || ||| || || || |||| |||||| || ||| Sbjct 1696648 CGCTGACGCTGAA-GAAGGGCACGCCAGACTCGCCGGCCGTGGCCTTGGCGAGGAGCGTC 1696706 Query 16236 TTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 || ||||| || ||| || ||||||| ||| || || || ||||||||||| Sbjct 1696707 TTGCCCGTGCCGGGCGGGCCGGCGAGGATGGCGCCGCGAGGGATCTTGGCGCC 1696759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741818054000