Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5 154 2e-32
seq2 86.0 7e-12
>seq5
Length=10013798
Score = 154 bits (170), Expect = 2e-32
Identities = 597/932 (64%), Gaps = 21/932 (2%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|| ||||||| || || | ||||| || ||| ||| || | | |||||| |
Sbjct 2425285 GGCAGGGCGAGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGAGTACTCGATG 2425344
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || |||| |||||| || |||||||| | ||||| ||||| ||||| |
Sbjct 2425345 ATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGG 2425404
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
|||||||| |||||||| |||||| |||| | |||||||||||||| | || ||| ||
Sbjct 2425405 TTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGCCTCGAGGATC 2425464
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 106695
| | ||| | | || | ||| | || | | | | || ||||| |||||||||
Sbjct 2425465 GAGTACCAGAGCTTCTG-GGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTT 2425523
Query 106696 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 106755
| ||| || || || ||||| || || ||||| ||| || || || || ||
Sbjct 2425524 TTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGG 2425583
Query 106756 ACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 106815
|| | || | ||| | || || ||| || ||||||||||| ||||| || |||||
Sbjct 2425584 GCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCA 2425643
Query 106816 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 106875
|| | || || || | || |||| || | || ||||| || | ||
Sbjct 2425644 GAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTC 2425703
Query 106876 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC----- 106930
|| ||||| | | || |||||||| || || || |||| |||| | |||
Sbjct 2425704 GAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCG 2425763
Query 106931 --TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 106988
| | | ||||| || | || || || || ||| ||| || ||||||||||| |
Sbjct 2425764 CTTGTTGCCGCCC----TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGG 2425819
Query 106989 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 107048
| | || || | || ||| || || || ||| ||| |||| | |
Sbjct 2425820 GCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGC 2425879
Query 107049 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 107108
||||||| | || || || || ||| ||| ||||| || ||| | | || |
Sbjct 2425880 GGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTGAGCG 2425939
Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168
| | ||||| || | ||| ||| ||||| || ||| |||||||| |||| ||
Sbjct 2425940 TGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCT 2425999
Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-- 107226
||| || || || || |||||||| || || | ||||| ||||||| ||||
Sbjct 2426000 GCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAACAT--CTTGCT 2426057
Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286
||||| | ||| ||||| | ||| || |||| || || |||||||| |
Sbjct 2426058 CGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCAGATGCCGACCGA 2426117
Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGA 107344
||| ||||| | ||||| || ||| || | || |||| | |||| |||| ||
Sbjct 2426118 CACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGC--TTGAGGAGG 2426175
Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
||| ||| || || |||| ||||||||
Sbjct 2426176 TAGGATCGCTCGAGAGTCTTGAAGCCAAAGTA 2426207
>seq2
Length=5461500
Score = 86.0 bits (94), Expect = 7e-12
Identities = 296/456 (65%), Gaps = 18/456 (4%)
Strand=Plus/Minus
Query 116985 ATAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 117044
|||||| |||| || ||||| ||||| |||||||| ||| | ||| ||||| |||||
Sbjct 1982225 ATAGTCGGCAACACGTTTCTCGAAGAAATTGGTCTTGCCACCGAGGGAGATGTTCTCCAT 1982166
Query 117045 AAAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAG 117098
||||| || || ||| || || | | | | || | | |||| ||
Sbjct 1982165 GAAGTCGAAGGGGTTCGACGATTTGTACACCTTCTCGTTGCCGAGAGCAACA------AG 1982112
Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158
||||||||| | || |||| ||||||| |||| | ||||| |||| ||
Sbjct 1982111 GAGACGATCGGCAACGAACTCGATGTACTGCTTCATCAAGGTGGCATTCATGCCGAGCAG 1982052
Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218
| ||||||||| || || || |||| | | |||||| || || || | | |||
Sbjct 1982051 AGCACATGGGAGGGCCTCGGTGAGGAACTCCTGCTCAATGGTGACGGCGTCGGTGATGAT 1981992
Query 117219 GGCGTGGAT-AGTTTC--GGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGC 117275
| ||| ||| | ||| | | | | | || | | | || || |||| |
Sbjct 1981991 GTCGTTGATGACCTTCTTGCTGGCCCGGTTGTTGAGGTGCGAATGCAACAGG--CACG-C 1981935
Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335
||| || ||| ||||||||||| || || || || || || ||||| || || ||
Sbjct 1981934 AAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGACCAGG 1981875
Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 117395
||||||||| |||||||||| ||| | || | | ||| | ||| ||||||||| ||
Sbjct 1981874 CATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAGATGCC 1981815
Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAA 117431
|| || ||||| |||| ||| | | ||||||
Sbjct 1981814 TTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAA 1981779
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980246893000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |