Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq11 143 6e-29
seq5 125 2e-23
seq1 116 8e-21
>seq11
Length=1832425
Score = 143 bits (158), Expect = 6e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || || || ||||| ||| || || | |||||||||
Sbjct 1806814 ACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCG 1806755
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || |||||||| || || ||||| || ||||| ||
Sbjct 1806754 AGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGG 1806695
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| ||| ||||| |||||||| | ||||||
Sbjct 1806694 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 1806635
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 1806634 CCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606
>seq5
Length=10013798
Score = 125 bits (138), Expect = 2e-23
Identities = 147/199 (74%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| ||| || || | || || |||
Sbjct 3224409 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCG 3224350
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || |||||||| ||||| ||||| || ||||| |||
Sbjct 3224349 AGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGA 3224290
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || || ||||||||| ||||| || ||||| | |||||
Sbjct 3224289 ATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCTTG 3224230
Query 195112 CCTGTCAAAGTTTTTACGA 195130
|| || | || || ||||
Sbjct 3224229 CCCGTGAGTGTCTTGACGA 3224211
Score = 123 bits (136), Expect = 6e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
||||| || |||||| ||| || || || ||||| ||| |||| || | || || ||
Sbjct 3224865 ACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAG-GTACGGCCGTCCTC 3224807
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| || || ||||| || ||||| ||
Sbjct 3224806 GAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 3224747
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || ||| ||||| || || |||||||| |||||| || | || | ||||||
Sbjct 3224746 AATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGTCTT 3224687
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | |||||
Sbjct 3224686 GCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657
Score = 116 bits (128), Expect = 8e-21
Identities = 139/186 (75%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
|| ||||| || || ||||| || || || |||||||||| |||| || | ||||| ||
Sbjct 3224117 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAG-GTCCGGCCATCCTC 3224059
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| ||||| ||||| || ||||| ||
Sbjct 3224058 GAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 3223999
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||| || || || |||||||| || || ||||| || | |||||
Sbjct 3223998 GATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTCTT 3223939
Query 195111 TCCTGT 195116
|| ||
Sbjct 3223938 GCCCGT 3223933
Score = 116 bits (128), Expect = 8e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| ||| || || | || || |||
Sbjct 3224637 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCG 3224578
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || ||||| ||||| || || ||||| || ||||| ||
Sbjct 3224577 AGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 3224518
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || || |||||||| ||||| || ||||| | ||||||
Sbjct 3224517 ATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTT 3224458
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || || || | ||||||
Sbjct 3224457 CCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429
>seq1
Length=2797149
Score = 116 bits (128), Expect = 8e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| || | | ||| | |||||||||||||||||||| || |||||
Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| || ||| || || || |||||||| || ||||| || || || |||||| || ||
Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| ||| || |||||||| |||| |||||| || || | || || |||||
Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 1553207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480533857525
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |