Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 1e-18
seq11 82.4 5e-11
>seq5
Length=10013798
Score = 107 bits (118), Expect = 1e-18
Identities = 143/195 (73%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| ||||| ||||| ||| | || | || || ||||| || ||||||||
Sbjct 3224619 TCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 3224560
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||||||||| |||| | ||||||||||| |||||| || || ||
Sbjct 3224559 ATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTCGACTTAAC--AT 3224502
Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
||||||| | ||| | ||| || |||| ||| ||||| ||||| ||||| |||||
Sbjct 3224501 --TATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTT 3224444
Query 34967 CACAAAGATCTGCAT 34981
|||||||| |||||
Sbjct 3224443 GACAAAGATTTGCAT 3224429
>seq11
Length=1832425
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844
||||| || ||||| ||||| ||||| ||| | || |||| || ||||| || |||
Sbjct 1806802 GTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCG 1806743
Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904
|| || || || || || ||||| | || | ||||||||||| ||||| |||
Sbjct 1806742 GCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTG 1806683
Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964
||| | || | || | ||| || || | ||| || || || |||||||| |||
Sbjct 1806682 ACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTC 1806623
Query 34965 TTCACAAAGATCTGCATATT 34984
|| || || |||||||| ||
Sbjct 1806622 TTGACGAAAATCTGCATCTT 1806603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633303264600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |