Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq5 127 2e-24
seq2 86.0 7e-12
>seq5
Length=10013798
Score = 127 bits (140), Expect = 2e-24
Identities = 550/864 (64%), Gaps = 17/864 (2%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||| ||||| ||||||| || | |||||||| || || |||| || |||
Sbjct 2426141 CCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAACATCGAGCGCGTC 2426082
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||| ||| | ||||| |||| ||||||| ||||| | || || ||||
Sbjct 2426081 ATCGAGACGTACAATCTCATGTCGAGCAAG--ATGTTCACGCACGCCTCGCCGACGCTCT 2426024
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
|||| || || || || ||||| |||| |||||||| ||| || ||||| |
Sbjct 2426023 TCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGACATGAAGGACG 2425964
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| ||| | || ||||| | || || | | ||| || ||||| ||| ||| |
Sbjct 2425963 ACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATGATCTCCAAGATGGCCG 2425904
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| || || || | ||||||| | | |||| ||| ||| || || |
Sbjct 2425903 GCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTACATTGCCGGCACCA 2425844
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| ||| || | || || | || ||||||||||| || ||| ||| || || || |
Sbjct 2425843 ACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACG 2425784
Query 75570 TAAATCAAGCGGGGCGTCG-CAAGGGGTC------CATCGCGGTCTACTTGGAACCATGG 75622
| | || ||||| | |||| || | | |||| ||||| ||||||| |||
Sbjct 2425783 TCGACCA----GGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGG 2425728
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| | | ||||| || || | || ||||| || | || |||| ||
Sbjct 2425727 CACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGC 2425668
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
| || || || | || ||||| || ||||| ||||||||||| || ||| ||
Sbjct 2425667 GCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAG 2425608
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
|| | ||| | || | || || || || || || ||| ||||| ||
Sbjct 2425607 AACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGC 2425548
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862
|| ||||| || || || ||| |||||| || ||||| | | | ||| ||
Sbjct 2425547 GACGAGTTCGAGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACGGTC 2425488
Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
| ||| | || | | ||| | | || ||| | | ||||||||||| || | || |
Sbjct 2425487 CGCGCC-CAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTT 2425429
Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981
||||| |||||||| || || ||| ||||| ||||| ||||| | || || |||
Sbjct 2425428 CATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCG 2425369
Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041
||||| || || ||||| || || | |||||| | | || ||| ||| || ||
Sbjct 2425368 CAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTG 2425309
Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065
||| | || || ||||||| ||
Sbjct 2425308 CAACCTCGCGTCGCTCGCCCTGCC 2425285
>seq2
Length=5461500
Score = 86.0 bits (94), Expect = 7e-12
Identities = 296/456 (65%), Gaps = 18/456 (4%)
Strand=Plus/Plus
Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130
|||||| | | ||| |||| ||||| || || || ||||||||| ||| | |||
Sbjct 1981779 TTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTC 1981838
Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190
| | || | ||| |||||||||| ||||||||||| || || ||||| || ||
Sbjct 1981839 GCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAG 1981898
Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTG 65250
|| || || || ||||||||||| ||| || |||| |||| || || | |
Sbjct 1981899 CTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTG-CGTG--CCTGTTGCATTCGCAC 1981955
Query 65251 CGTAATAGACCCACTACC--GAAACT-ATCCACGCCATCGTGAAAGAGGCGGTTGAGATT 65307
| || | | | | | ||| | ||| ||| |||| | | || || || |||
Sbjct 1981956 CTCAACAACCGGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATT 1982015
Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367
||| | | |||| || || || ||||||||| ||| |||| ||||| | |
Sbjct 1982016 GAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCTCTGCTCGGCATGAATGCCACCTTG 1982075
Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GCCACC 65426
||| ||||||| |||| || | ||||||||||| |||| | | || |
Sbjct 1982076 ATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTCCT------TGTTGCTCTCGGCAAC 1982129
Query 65427 CA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGG 65481
| | | || || ||| || || ||||| ||||| ||||| ||| | |||
Sbjct 1982130 GAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAGAACATCTCCCTCGGTGGC 1982189
Query 65482 AAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTAT 65517
|||||||| ||||| ||||| || |||| ||||||
Sbjct 1982190 AAGACCAATTTCTTCGAGAAACGTGTTGCCGACTAT 1982225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569040716000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |