Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2 441 9e-119 seq5 179 5e-40 seq1 138 1e-27 >seq2 Length=5461500 Score = 441 bits (488), Expect = 9e-119 Identities = 1013/1514 (67%), Gaps = 20/1514 (1%) Strand=Plus/Plus Query 195374 AATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGTCTC 195433 || ||||| || ||||| || || || |||| ||||||||| || || | || || || Sbjct 3943447 AACGACCAGGGCAACCGAACGACGCCCTCGTTCGTTGCCTTCACTGACACGGAGCGCCTG 3943506 Query 195434 GTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGACGCG 195493 |||| |||||||| || || ||| || ||||||||| ||| |||||||||||||| Sbjct 3943507 ATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACAACACTGTCTTTGACGCC 3943566 Query 195494 AAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGG 195553 ||||| | ||||| |||||||| ||| | ||||||| ||| || ||| ||| Sbjct 3943567 AAGCGATTGATTGGCCGCAAGTTCAGTGATGCCGAGGTCCAAGCCGACATGAAGCACTTC 3943626 Query 195554 TCTTATGAAGTTGTTC--CCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACG 195611 | | | ||| | || | | ||||| ||||| || || | || || || | | Sbjct 3943627 CCCT-TCAAGATCATCGACAAGGGTGGC----AAGCCCATAATCGAGGTCGAGTTCAAGG 3943681 Query 195612 GTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGG 195671 | ||| |||| || ||||||| || || || || ||||| | | |||||| | Sbjct 3943682 GCGAGCAGAAGACGTTCACTCCCGAGGAGATCTCCTCCATGGTCCTCACCAAGATGCGTG 3943741 Query 195672 AGACTGCGGA-ATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCT 195730 ||||||| || | || | || | | |||| | || || || || || ||||| Sbjct 3943742 AGACTGCCGAGAGCTACCTCGGCTGCCA-AGTGACCAACGCTGTCGTCACCGTTCCTGCC 3943800 Query 195731 TACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAAC 195790 ||||||| || || || ||||| || |||||||| | | ||||| ||||| ||| Sbjct 3943801 TACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATTGCCGGTCTCAAC 3943860 Query 195791 TGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAAC 195850 || |||| ||||| || || || || || || ||||| |||||||| |||||||| Sbjct 3943861 GTCCTCCGAATCATCAACGAGCCTACCGCTGCCGCCATTGCCTATGGTCTCGACAAGAAG 3943920 Query 195851 AAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || | || || || | || || ||||||||||||||||| ||||||||||| Sbjct 3943921 GTCGAGGGCGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGTACCTTTGATGTCTCT 3943980 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || || | || || | || || ||||| || ||| | ||||||||||| ||||| | Sbjct 3943981 CTCCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCGACTGCTGGTGACACTCACTTG 3944040 Query 195971 GGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGTTCCGTCGAAA 196029 || ||||| || ||||| || || | || || ||| |||||||| || || Sbjct 3944041 GGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTCGTC-AATGAGTTCAAGCGCAA 3944099 Query 196030 GAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGA 196089 | | ||||| || | ||| || | || || || || || | || || || || Sbjct 3944100 GCACAAGAAGGACCTGTCTACCAACAGCCGTGCCCTGCGACGTCTCCGAACCGCTTGCGA 3944159 Query 196090 ACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATTGATTCGTTGTT 196149 || ||||| || ||||| ||||| | || || || | | || || || || |||| Sbjct 3944160 GCGCGCCAAGCGTACTCTGTCTTCCTCTGCCCAGACGTCGATCGAAATCGACTCTCTGTT 3944219 Query 196150 TGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGA 196209 ||| || || || ||||| || | || ||||| || ||||| || ||| | | || Sbjct 3944220 TGAGGGCATCGATTTCTACACCTCCATCACCCGCGCTCGTTTCGAGGAGCTCTGCCAGGA 3944279 Query 196210 TTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCAAAGATGGATAA 196269 | |||| | || | ||||| || | || || ||||| ||| |||| || Sbjct 3944280 TCTGTTCCGCTCCACCATCCAGCCTGTCGACCGCGTCCTGACCGACGCCAAGGTGGACAA 3944339 Query 196270 GTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCGAAGATTCAACA 196329 | ||||| | || || |||||||| || || || || ||||| || | || | Sbjct 3944340 GAGCCAGGTTCACGAGATCGTCCTTGTCGGTGGCTCCACTCGTATCCCCCGAGTGCAGAA 3944399 Query 196330 GATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAACCCGGATGAAGC 196389 | | | | || |||||| || || ||||| |||||||||| || || || Sbjct 3944400 GCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCGATCAACCCTGACGAGGC 3944459 Query 196390 AGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTG-----TTGACAATAAT 196444 ||||| || ||||| ||||| ||||||||||||||||| || | | | | | | | Sbjct 3944460 TGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATTCTCTCTGGCGACACCTCGTCCA-AGT 3944518 Query 196445 AACGTCCAA-GATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGGTCTTGAAACAGC 196503 || |||| || | ||||| || || || || || | ||| | ||| | || || || Sbjct 3944519 --CGACCAACGAGATCCTGCTTCTCGACGTCGCTCCTCTCTCCATTGGTATCGAGACTGC 3944576 Query 196504 GGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGACTAAGAAGGAACA 196563 || || | ||||| || | || | ||||| || || || || |||||| | Sbjct 3944577 TGGCGGCATGATGACCAAGCTCATCCCCCGCAACACCACCATCCCCACGAAGAAGTCCGA 3944636 Query 196564 AGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGTATATGAAGGAGA 196623 ||||| || || | ||||| || || || ||||| | ||||| || || || || || Sbjct 3944637 GGTCTTCTCCACCTTCTCCGACAACCAGCCTGGTGTGCTCATTCAGGTCTACGAGGGTGA 3944696 Query 196624 ACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGC 196683 ||| || | ||||| ||| | || || || | || || | ||||| || || | Sbjct 3944697 GCGCCAGCGCACCAAGGACAACAACCTGCTCGGCAAGTTTGAGCTCACGGGCATCCCTCC 3944756 Query 196684 TGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCT 196743 ||| || | ||||| || ||||| | || ||| || | ||||| || || ||| | Sbjct 3944757 TGCTCCTCGTGGTGTGCCTCAGATCGAGGTCACCTTTGACGTCGACGCCAACGGTATTAT 3944816 Query 196744 AAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGA 196803 || ||| | |||| || |||| ||||||| || | |||||||| |||||||| || Sbjct 3944817 CAATGTCTCTGCTGTCGAGAAGGGCACTGGCAAGTCCAACAAGATTGTCATTACCAACGA 3944876 Query 196804 CAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAG 196863 |||||| || || || || ||||| ||||| || ||| | ||||| || ||||||| Sbjct 3944877 CAAGGGCCGCCTGTCCAAAGAGGACATTGAGCGCATGCTGGCTGATGCCGAGAAGTACAA 3944936 Query 196864 GGAAGAAGACGAGG 196877 ||| || ||||||| Sbjct 3944937 GGACGAGGACGAGG 3944950 >seq5 Length=10013798 Score = 179 bits (198), Expect = 5e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || || || |||||||| || |||||||||||||| |||||||| Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 |||||||||||||| | || | ||||| || || ||||| ||||| || || || ||| Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3224548 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || ||||| || || ||||| || || || || ||||| || |||||| Sbjct 3224549 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAAC 3224608 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||||| || || ||||| || || | || || ||||| Sbjct 3224609 ATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTCCGCGGTGG 3224655 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || || | || || || || ||||| | ||||| || ||||| Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| ||| | || ||||||||| || ||||| ||||| || ||||| ||| Sbjct 3224717 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3224776 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| || || || ||||| || || || |||||| | || |||||| Sbjct 3224777 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 3224836 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||| |||||||| ||||| || Sbjct 3224837 ATCCAGAAGGAGAGCACTCTACATCTTGTACT 3224868 Score = 136 bits (150), Expect = 5e-27 Identities = 164/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || || || || || || || |||||||||||||| ||||| || ||||| ||||| Sbjct 3224213 GTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCGAC 3224272 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || |||| | |||||||| || ||||| ||||| || ||||| || || || || || Sbjct 3224273 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTCATC 3224332 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 ||||| || || ||||| || || || || ||||| || |||||| | || |||||| Sbjct 3224333 TTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGAAGGAG 3224392 Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 || || || ||||| || || | || || || || ||||| Sbjct 3224393 TCGACGCTCCACCTCGTCCTTCGTCTGCGTGGCGGCATGCAA 3224434 Score = 116 bits (128), Expect = 5e-21 Identities = 171/238 (72%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 195750 GACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATG 195809 ||||||| || |||||||| | | ||||| || | ||| || ||||| |||||| Sbjct 3115615 GACAGGCCACCAAGGACGCCGGTATCATTGCCGGCTTGAACGTGCTCCGAATTGTCAATG 3115556 Query 195810 AACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATG 195869 | || || || || || || || || || |||||||||| | | | ||| | | || Sbjct 3115555 AGCCCACCGCCGCGGCCATCGCGTACGGCCTGGACAAGACCGAAGGCGA-GCGCCAGATC 3115497 Query 195870 TATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTG 195929 || | ||| ||||| ||||||||||| ||||||||||| || ||| || || | Sbjct 3115496 -ATCG-TCTACGATCTTGGTGGTGGTACCTTTGATGTCTCCCTCCTCTCCATCGACCAGG 3115439 Query 195930 GTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || | ||||| || ||||||||||||||| || || || |||||||| ||||| || Sbjct 3115438 GTGTTTTCGAGGTTCTGGCTACTGCTGGTGACACCCACCTGGGTGGTGAGGATTTTGA 3115381 >seq1 Length=2797149 Score = 138 bits (152), Expect = 1e-27 Identities = 139/181 (77%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 171871 TTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATC 171930 || ||||| ||||| || || || || || || || || || ||||| || ||||| ||| Sbjct 1553207 TTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATC 1553148 Query 171931 GATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTT 171990 || || |||| ||||||| || || ||||| |||||||| || ||||||||| || | Sbjct 1553147 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTG 1553088 Query 171991 ATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAG 172050 || ||||||||||| ||||| ||||||||||| || | | || |||||| | || ||| Sbjct 1553087 ATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAG 1553028 Query 172051 G 172051 | Sbjct 1553027 G 1553027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861783254000