Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq3 107 6e-18 seq2 91.5 4e-13 seq5 89.7 2e-12 >seq3 Length=709076 Score = 107 bits (118), Expect = 6e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || || || || || || ||||| | |||||| |||| || |||||||| | || Sbjct 481557 GTCTTGACCGCCGTGTCGATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAATTCC 481498 Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739 |||| || || | | | ||| |||| ||||||||||| || |||||||| | | Sbjct 481497 GACGGTGTCAGACCGCGCAGGTACGAGTTCTCGACGAAACCACGGGCTTCGGGCGAGTAG 481438 Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799 || |||||| || || || || || |||| || | ||| | || || ||||| || Sbjct 481437 TCATCCTTGGTGAAATGGGGAAGCGTTCTGTACTTGAAACCGAACGGAATTCGCTTGCCT 481378 Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843 || ||| ||||||| || | | || | ||||||| |||||||| Sbjct 481377 TCCACGATCTGCTGGCCGACGAGCGCAGTCATCTGAGAAATATT 481334 >seq2 Length=5461500 Score = 91.5 bits (100), Expect = 4e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496 ||||||| || ||||| |||| ||||| | |||||||| |||||| | | Sbjct 1981717 TTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAGTCCA 1981776 Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556 || || | || ||||| ||||| | || || ||||| || ||||| ||||| | Sbjct 1981777 CGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTT 1981836 Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616 || ||| || || ||||| || ||||| ||| | | ||||| ||| || || |||| Sbjct 1981837 TCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACG 1981896 Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 | || || || | || |||| ||||||||||| ||||| Sbjct 1981897 AGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGC 1981936 >seq5 Length=10013798 Score = 89.7 bits (98), Expect = 2e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490 ||||| | | | ||||| || | || | || || ||||| |||| | ||| ||| Sbjct 5548576 TGGACTCGGAACGCATCCGACACCTCGAACAGGCGCTCCTTGAGGAAGGCGGCTGCGCCG 5548517 Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550 || | |||||||||||||||||||||||| ||||| || || || |||||||| || | | Sbjct 5548516 TGAGCAATCATACAATCACGCTCCATTTCTCCGAACCGCAGGCCGCCATCGCGCGCGCGA 5548457 Query 251551 CCCTCGGCAGGCTG 251564 ||||| | ||||| Sbjct 5548456 CCCTCCACCGGCTG 5548443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816185675275