Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3 107 6e-18
seq2 91.5 4e-13
seq5 89.7 2e-12
>seq3
Length=709076
Score = 107 bits (118), Expect = 6e-18
Identities = 158/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679
|| || || || || || || ||||| | |||||| |||| || |||||||| | ||
Sbjct 481557 GTCTTGACCGCCGTGTCGATGAGACCTTCTCGACCAGCCATGGCGTGGAAGAAGAATTCC 481498
Query 302680 TCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCG 302739
|||| || || | | | ||| |||| ||||||||||| || |||||||| | |
Sbjct 481497 GACGGTGTCAGACCGCGCAGGTACGAGTTCTCGACGAAACCACGGGCTTCGGGCGAGTAG 481438
Query 302740 TCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCA 302799
|| |||||| || || || || || |||| || | ||| | || || ||||| ||
Sbjct 481437 TCATCCTTGGTGAAATGGGGAAGCGTTCTGTACTTGAAACCGAACGGAATTCGCTTGCCT 481378
Query 302800 TCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|| ||| ||||||| || | | || | ||||||| ||||||||
Sbjct 481377 TCCACGATCTGCTGGCCGACGAGCGCAGTCATCTGAGAAATATT 481334
>seq2
Length=5461500
Score = 91.5 bits (100), Expect = 4e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 133437 TTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGA 133496
||||||| || ||||| |||| ||||| | |||||||| |||||| | |
Sbjct 1981717 TTCCTTGCATCCGCAAGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAGTCCA 1981776
Query 133497 GTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGT 133556
|| || | || ||||| ||||| | || || ||||| || ||||| ||||| |
Sbjct 1981777 CGTTCGCCCAAAGACTTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTT 1981836
Query 133557 TCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACG 133616
|| ||| || || ||||| || ||||| ||| | | ||||| ||| || || ||||
Sbjct 1981837 TCGCCTCAATCTTCTGGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACG 1981896
Query 133617 AACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656
| || || || | || |||| ||||||||||| |||||
Sbjct 1981897 AGCTCATCTCGCGTGATGAGGGTCTTCACACCGATTTTGC 1981936
>seq5
Length=10013798
Score = 89.7 bits (98), Expect = 2e-12
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 251431 TGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCG 251490
||||| | | | ||||| || | || | || || ||||| |||| | ||| |||
Sbjct 5548576 TGGACTCGGAACGCATCCGACACCTCGAACAGGCGCTCCTTGAGGAAGGCGGCTGCGCCG 5548517
Query 251491 TGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTA 251550
|| | |||||||||||||||||||||||| ||||| || || || |||||||| || | |
Sbjct 5548516 TGAGCAATCATACAATCACGCTCCATTTCTCCGAACCGCAGGCCGCCATCGCGCGCGCGA 5548457
Query 251551 CCCTCGGCAGGCTG 251564
||||| | |||||
Sbjct 5548456 CCCTCCACCGGCTG 5548443
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816185675275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |