Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq5 244 1e-59 seq1 82.4 7e-11 >seq5 Length=10013798 Score = 244 bits (270), Expect = 1e-59 Identities = 1081/1681 (64%), Gaps = 68/1681 (4%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCG--CGGTATTGTTGCAATATTTT 138415 |||||||| || |||||||| || | || |||| ||| || | ||||| || | Sbjct 2424580 ATCTCCCAGACCGTCTTGTAGAGGGCCTTGAT--GTCGGCCGGGATGTTGGCAATGTTCT 2424637 Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTC--AA 138473 | || |||||| |||| |||||||| || |||| | ||| | |||| || | Sbjct 2424638 GGATCGACCCGTTCTCCGCGATGATGCGGTTCTTCATCGCGTCG--GACCAGAGTCCCAT 2424695 Query 138474 CTTGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCG 138533 | || | ||| || | ||| | ||| | ||||| || || ||||| | || || Sbjct 2424696 GTCGACGAGGTCCTTGAGCAGCCAGGGGTTGACCACCTGGAACTCGCCGGCGAGGACGCG 2424755 Query 138534 ACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGC 138593 || ||| |||||| ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 2424756 GCGCTGGTAGATGTTGGACGTGTACGGCTCGAAGCACTCGTTGTTGCCCAGGATCTGCGA 2424815 Query 138594 CGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGAT 138653 |||| | || |||||||| ||| | || || || || | ||||| |||||| Sbjct 2424816 CGTGCTGGCCGTCGGCATCGGCGCGAGCAGCAGGCTGTTGCGGATGCCGTGCTCCTTGAT 2424875 Query 138654 -TCGTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGT 138712 ||| | |||| | ||| ||||| | || || || ||||||||| ||| Sbjct 2424876 CTCGGCGCGC-AGCGTCTCCCACTCCCAGAGGTCCGACGGCTTGACGTTCCACATGTCGA 2424934 Query 138713 ACTGTAACATTCCCAAACTTGCG-GGACTGCCTTCGTACGAA--TCGTATACA--CCAAA 138767 |||| | || ||| | || || | || || | || ||| ||| || Sbjct 2424935 ACTGGAGGATGCCC-----TCCGAGGCCGGCGATCCCTCAAAGGTCGAGTACGGGCCCTG 2424989 Query 138768 CTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTG 138827 ||| | | || |||| | || || || | | ||| || || ||| ||||| Sbjct 2424990 CTCCTTGGACAGCTCGACCGACTCCGTCAGGGCCGCGTGGTAGATGGTCTCGAAGATCTG 2425049 Query 138828 CTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTC 138887 || || ||| || ||||||| | |||| | |||||||| ||| ||| ||||| Sbjct 2425050 CTTGTTCAGCTCGCGCGCCTCGGGGGACTCGAAGGGCATGCGCAGCGCGAGGAAGGCGTC 2425109 Query 138888 GGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-G 138946 ||| || || || ||||| || |||| || || ||||| | || ||| ||||| | Sbjct 2425110 GGCGAGGCCCTGGACGCCGACGCCGATGGGTCGGTGGCGGAAGTT----GCTGTTGCGCG 2425165 Query 138947 CTTC---GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCT 139003 | || || || || | ||| || |||||||| ||| | || || ||||| || Sbjct 2425166 CCTCCTGGACGGGGTAGTGGTTGACGTCGATGATGCGGTTGAGGTTGCGGACGACGACGC 2425225 Query 139004 TAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTC- 139061 ||| | | | | | | | || ||||| |||| |||||| |||||| | | | Sbjct 2425226 GCGTCACCT-CGTGCAGCTTCTTGAAGTCGTAGCAGCCCTCGTTGTAGTCGACAAAGGCC 2425284 Query 139062 GACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCT 139121 | || | | | ||| || | |||||| || ||||| |||||||| | Sbjct 2425285 GGCAG-------GGCG---AGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGA 2425334 Query 139122 GTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATT 139181 ||| |||| || |||| |||| || | |||||| || | || | || || Sbjct 2425335 GTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTT 2425394 Query 139182 GCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGT 139241 ||| || ||||| || || || ||||| ||||| | || |||| || ||| || | Sbjct 2425395 GCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGC 2425454 Query 139242 CTCTATAATGAATTTGAACAAGTCCCTAGCTTGTA---TTTGACGCACGTAAAGTTCGTC 139298 ||| | || | | | | | | || | | | | || || | | || Sbjct 2425455 CTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGC---GGCCCTC 2425511 Query 139299 GCGCTCGTACTTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGC 139357 |||||||||||||||||| || | ||||| |||| | |||||| ||| | || || Sbjct 2425512 GCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGT-CGCCGTAGCAGTCGGCGAGGCCGG 2425570 Query 139358 GACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACA 139417 | |||| || || |||||||||| ||| |||||||| || ||||||| ||||||| | Sbjct 2425571 GGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGA 2425630 Query 139418 GATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGT 139477 | || || ||||| | |||| | || |||||||| | || ||| || || Sbjct 2425631 GGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGT 2425690 Query 139478 TACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCA 139537 | || || || || ||||||||||| |||||||| |||||||| |||||||| | Sbjct 2425691 TCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGA 2425750 Query 139538 TTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGC 139594 ||||| ||| ||| || || || ||||||| || | | || ||||| |||| Sbjct 2425751 AGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGC 2425810 Query 139595 GCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG--GGA-CTGTT 139649 | | ||| ||| | ||| | | || |||||||||| ||| ||| ||| | | | Sbjct 2425811 GAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGC--CGGCAATGTAGGATCCGGT 2425868 Query 139650 GCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAAC 139709 | || |||| | || | |||| |||||| |||||| | | ||||| || | | Sbjct 2425869 G---GCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGC 2425925 Query 139710 GCAA-TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAA 139768 ||| || | | || ||||| || || ||||||||||||| ||| ||| || | Sbjct 2425926 GCACGTCTTG-AGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGA 2425984 Query 139769 AGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCG 139828 |||| ||||| || |||| | ||||||||| || || || || ||||||| Sbjct 2425985 AGCACGACGACAGCTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCG 2426044 Query 139829 TGAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGT 139888 ||||||| | ||||||| | | |||||| |||||| ||| | | || | || Sbjct 2426045 TGAACATCTTGCTCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCC 2426104 Query 139889 GGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGA 139948 ||| ||||| || || ||||| | ||| || || || ||| | | | ||| | || Sbjct 2426105 AGATGCCGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGA 2426164 Query 139949 tttttttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 || || || | || ||| || |||||| ||||||||||| |||||||| || Sbjct 2426165 GCTTGAGGAGGTAGGATCG--CTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTC 2426222 Query 140007 G 140007 | Sbjct 2426223 G 2426223 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || ||||| || || || || || || ||||| || || | | Sbjct 3224429 ATGCAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCG 3224488 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 3224489 GACACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAG 3224548 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||||||||| || ||||| ||||| | | | || || || ||| Sbjct 3224549 CAACGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAAC 3224608 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | || | || | ||||| ||| Sbjct 3224609 ATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTCCGCGGTGGC 3224656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | ||||| || || || ||| | || || ||| | | Sbjct 3224657 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 3224716 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | ||||| ||||| || ||||| || || || || ||||| || Sbjct 3224717 GACACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAG 3224776 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||| || ||||| || ||||| ||||| | | | || || || ||| Sbjct 3224777 CAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAAC 3224836 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || ||||| | || |||| ||||||| ||| Sbjct 3224837 ATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGC 3224884 >seq1 Length=2797149 Score = 82.4 bits (90), Expect = 7e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 || || ||||| || || || |||||||| ||||| || | | ||||| | || | Sbjct 1553201 AAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTATCGACAAT 1553142 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || |||||||| ||||| || || || || || ||||| ||| | ||||||||| Sbjct 1553141 GTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATTGATCTTT 1553082 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 || || || ||||| || ||| | | |||| || || ||||| || |||| Sbjct 1553081 GCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAAGG 1553027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897178221000