Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq11 127 1e-24
seq5 111 1e-19
seq1 84.2 1e-11
>seq11
Length=1832425
Score = 127 bits (140), Expect = 1e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || ||||| | ||||||||||||||| ||||| ||||| ||| |||| ||||
Sbjct 1806818 CAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 1806759
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || || ||||| | || | |||||||||||
Sbjct 1806758 TTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 1806699
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || |||||| | || | || | ||| || |||| ||| || ||
Sbjct 1806698 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 1806639
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| |||||||||||||| || || ||||||||
Sbjct 1806638 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606
>seq5
Length=10013798
Score = 111 bits (122), Expect = 1e-19
Identities = 156/217 (72%), Gaps = 8/217 (4%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| ||||| ||| | || | ||
Sbjct 3224640 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224581
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || ||||||||||| |||| | |||||||||||
Sbjct 3224580 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 3224521
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || || || || || ||||||| || | ||| || || | ||| ||
Sbjct 3224520 TGGATCTTCGACTTAAC--AT--TATCGATTGTGTCCGACGACTCCACCTCGAGGGTGAT 3224465
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||||||| ||||| ||||| |||||||| ||||||
Sbjct 3224464 GGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCATG 3224428
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| || || || | | | || ||||
Sbjct 3224120 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGGCCATCC 3224061
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| |||||||| ||||| || |||||||| | || | |||||||||||
Sbjct 3224060 TCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 3224001
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | |||||| |||| || ||||||
Sbjct 3224000 TGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 3223941
Query 34946 TTTCCCGTGA 34955
|| |||||||
Sbjct 3223940 TTGCCCGTGA 3223931
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || || | |||||||||||||| ||||| ||||| | | | || | ||
Sbjct 3224869 CAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGGCCGTC 3224810
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| |||||||| ||||| || |||||||| |||| | |||||||||||
Sbjct 3224809 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 3224750
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| || || || ||| | || | || | || || || | || || ||
Sbjct 3224749 CTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGT 3224690
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||| || || | ||||| || ||||||||||||
Sbjct 3224689 CTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 3224656
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||| | || ||||||||| ||||| ||||| ||| | || | ||
Sbjct 3224412 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224353
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||| ||||| || || || ||||| | || | |||||||||||
Sbjct 3224352 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 3224293
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || ||||| | |||| || | ||| || || | ||| ||||||
Sbjct 3224292 TGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 3224233
Query 34946 TTTCCCGTGAGGGTCTTTAC 34965
|| |||||||| ||||| ||
Sbjct 3224232 TTGCCCGTGAGTGTCTTGAC 3224213
>seq1
Length=2797149
Score = 84.2 bits (92), Expect = 1e-11
Identities = 131/185 (71%), Gaps = 8/185 (4%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| |||||||| | | || |||| || || ||||| || || ||||
Sbjct 1553027 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 1553086
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| || |||||| || | || | ||||||||||| | || || ||||| ||
Sbjct 1553087 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 1553143
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| ||| | |||||| |||| || || ||||| ||||| ||||||||
Sbjct 1553144 -TGTCGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTC 1553202
Query 34964 ACAAA 34968
|| ||
Sbjct 1553203 ACGAA 1553207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692502296425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |