Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq5 233 3e-55 seq2 141 1e-27 >seq5 Length=10013798 Score = 233 bits (258), Expect = 3e-55 Identities = 359/507 (71%), Gaps = 19/507 (4%) Strand=Plus/Minus Query 259681 GCACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTT 259740 ||||||||||| |||||| | |||||| | ||| ||| ||||| |||| |||||| Sbjct 2426262 GCACAAGGAGGAGCTCGACTCGGCCATCGTCTACGACCGCGACTTCAACTACCAGTACTT 2426203 Query 259741 TGGTCTGGCGAC-CTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGC 259799 ||| | ||| || | || | |||||||| ||| | || | ||||||||| Sbjct 2426202 TGGCTTCAAGACTCTCGAGC-GATCCTACCTCCTCAAGCTCAACGGCAAGATCGTCGAGC 2426144 Query 259800 GGCCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACA 259859 | || ||| | ||| ||||||| || | | ||| | |||| ||||| Sbjct 2426143 GACCGCAGCACATGATCATGCGCGTGTCGGTCGGCA--TCTGGGG----------CGACA 2426096 Query 259860 ATGCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCA 259918 | | |||| ||| ||| || ||| | ||||||| |||| | ||||||| Sbjct 2426095 ACA---TCGAGCGCGTCATCGAGACGTACAATCTCATGTCG-AGCAAGATGTTCACGCAC 2426040 Query 259919 GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTG 259978 || |||| |||||||| || ||||||||||||| ||||| ||||||||||| || Sbjct 2426039 GCCTCGCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTC 2425980 Query 259979 TTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTC 260038 | |||||||||| ||| |||||||||||||| |||||||||||| |||||| | Sbjct 2425979 GTCGACATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAAGACGTGCGCCATG 2425920 Query 260039 ATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCC 260098 ||||||||| ||||||||||||||| | | ||| | |||||| | || || Sbjct 2425919 ATCTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCC 2425860 Query 260099 TACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAAC 260158 ||| | || ||||||||||| ||||||||| | ||||||||||||||| || ||| Sbjct 2425859 TACATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAAC 2425800 Query 260159 GACACGGCGCGCTACGTCGACCAGTGC 260185 ||||||| || |||||||||||| || Sbjct 2425799 AACACGGCCCGGTACGTCGACCAGGGC 2425773 Score = 172 bits (190), Expect = 8e-37 Identities = 370/547 (68%), Gaps = 22/547 (4%) Strand=Plus/Minus Query 262875 CCGCTGGGACTGGGACGCACTGCGGGCGTCG-GTTCGAC-AGCATGGCCTGCGCAACTCG 262932 || |||||| ||||| | ||||| || || | || | |||| ||| | |||||| Sbjct 2424906 CCTCTGGGAGTGGGAGACGCTGCGCGC--CGAGATCAAGGAGCACGGCATCCGCAACAGC 2424849 Query 262933 TTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGGCG 262992 |||| | |||| ||||| ||||||| |||||||||||||||||||||| |||| Sbjct 2424848 CTGCTGCTCGCGCCGATGCCGACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGC 2424789 Query 262993 TTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACCGTG 263052 |||||| |||| |||||||||| ||||||||| ||| | ||||| || ||| Sbjct 2424788 TTCGAGCCGTACACGTCCAACATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTCCAGGTG 2424729 Query 263053 GTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGACTTTCGC 263112 ||||||| | ||| ||||| | | || | || || ||| | || | Sbjct 2424728 GTCAACCCCTGGCTGCTCAAGGACCTCGTCGACATGGGACTCTGGTCCGACGCGATGAAG 2424669 Query 263113 GACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGCCGCCC 263172 |||| |||| |||| | || ||| | ||| | ||| | || | ||| || Sbjct 2424668 AACCGCATCATCGCGGAGAACGGGTCGATCCAGAACATTGCCAAC------ATCCCGGCC 2424615 Query 263173 GATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTGATATG 263232 || ||||||| |||| |||||| || |||||| | | | ||| | | | ||| Sbjct 2424614 GACATCAAGGCCCTCTACAAGACGGTCTGGGAGATTTCGCAGCGGCAGGTGGTGCAGATG 2424555 Query 263233 GCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCGCCGAC 263292 ||||||||||||| ||| |||||||| ||||||||||||| | || | ||| Sbjct 2424554 GCGGCCGACCGCGGCGCCTTCATCGACCAGTCCCAGTCGCTCAACATTCACATGAAGGAC 2424495 Query 263293 CCGAC---GGCCGAGAGCATCACGTCGATGCAC---GCCTATGCGTGGCGTCGCGGCCTC 263346 ||||| || | || |||||| |||||| ||| | ||| | ||||||| Sbjct 2424494 CCGACCATGGGCAAG---ATCACGAGCATGCACTTTGCC---GGCTGGAAGCTCGGCCTC 2424441 Query 263347 AAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTC 263406 ||||| ||||||||||| ||||| || | |||| ||| |||| || ||||||||| Sbjct 2424440 AAGACGGGCATGTACTACCTGCGGACGCAAGCCGCCGCCGCGCCCATCCAGTTCACCGTC 2424381 Query 263407 GATCAGG 263413 || |||| Sbjct 2424380 GACCAGG 2424374 Score = 152 bits (168), Expect = 7e-31 Identities = 335/502 (67%), Gaps = 16/502 (3%) Strand=Plus/Minus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 |||||| |||||| ||||||||| ||| ||||||||||||||||||||||||| | Sbjct 2425775 GGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTT 2425716 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 | | | || ||||| |||||||||||||| ||||| || | |||||||| Sbjct 2425715 TTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAA-GGAGGAGG-----TGCGCGCGCGC 2425662 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || || || |||| |||||| || ||| ||| | | || | || Sbjct 2425661 GACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGAACGGC 2425602 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCC 262027 |||||| ||||| | ||||| |||| |||||||| ||| ||||| |||| | Sbjct 2425601 GACTGGACGCTCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAG 2425542 Query 262028 TTTGACGCCCTCTATGAGNNNNNNNNNNNNNNNNNNNNNNCGCGGAC---CGTC-GTGCC 262083 || || || || || || ||||| | | | || | Sbjct 2425541 TTCGAGGCGCTGTACGA----AAAGTACGAGCGCGAGGGCCGCGGCCGCAAGACGGTCCG 2425486 Query 262084 CGCACGACAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACAT 262143 ||| | || |||||| | || ||| |||||| | ||||| |||| |||| ||| Sbjct 2425485 CGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAGACGGGCAACCCCTTCAT 2425426 Query 262144 GGTCTACAAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA-CGACAG 262202 | | ||||||||||| ||||| | ||||||||| ||||||| || || | | ||| Sbjct 2425425 GCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAACCTCGGGACGATCCGCAG 2425366 Query 262203 AGGCCAACCTGTGCACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCA 262262 |||||||||||||||||||| || ||| ||| ||||| ||||| || |||| Sbjct 2425365 -CTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCA 2425307 Query 262263 ACCTCTCGAGCGTGGCCCTGCC 262284 ||||| || | |||||||| Sbjct 2425306 ACCTCGCGTCGCTCGCCCTGCC 2425285 Score = 152 bits (168), Expect = 7e-31 Identities = 338/497 (68%), Gaps = 24/497 (5%) Strand=Plus/Minus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 |||||| ||||| | || | |||||| ||||| ||| ||||| ||||||||| | || Sbjct 5548496 CTCCATTTCTCCGAACCGCAGGCCGCCATCGCGCGCGCGACCCTCCACCGGCTGCCTCGT 5548437 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 | ||||| || || || || | || ||||||||||||||| | ||| ||| ||||| Sbjct 5548436 CATGATCTGCACCGGCCCTCGGGCGCGCGCGTGAATCTTGTCGTCGACCATGTGCCGCAG 5548377 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGC---CGGTGT 1600433 |||||||||| ||| |||| | |||| | ||| || ||| || | |||| Sbjct 5548376 CCGCTGGTAGTAGGTCGG-GCCGAAGAAGACCTGCGCGCGCA---GCTTGCGACCCGTGT 5548321 Query 1600434 GCGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCGTG---GCGAGCCAACTCGG 1600490 || || ||| | | ||| |||| || | | ||||| ||| || ||| | Sbjct 5548320 GCCCGTTGTACATGATCTCGAAGCCGCGAGACTGGTAGCCGTGCTTGCGCAGCAGCTCCG 5548261 Query 1600491 CGGCGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGC 1600550 | || |||||| || ||| || |||||||| | |||||| | ||||||| Sbjct 5548260 AG---ACCGAGTCGACCGTCACGTCGGTGAAGGGCGTCGCATCGCCCTCCATGCCCTCGA 5548204 Query 1600551 GGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGA 1600610 | | || |||| ||||| ||| |||| | | | || ||||| |||||||| | Sbjct 5548203 GCGTCGAAACTTTGCTGAGGAGACACTCGATCAGATGGGCAATCGTCATTCGCGACGGAA 5548144 Query 1600611 TGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGT 1600670 | ||||| |||||||| | |||||||||||| | || | | ||| ||||||||| Sbjct 5548143 TCGCGTGAGGGTTGATGATGATGTCGGGCGTGACGCCCTCCC---GCGTGAAGGGCATGT 5548087 Query 1600671 CCTC--GGTGGAGCG-CACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTT 1600727 |||| | || || ||| ||| | ||||||||| || ||||| ||||| | | | Sbjct 5548086 CCTCCTGCCGGTACGTCAC---GCCGATGGTGCCCTTCTGCCCGTGACGCGAGGCAAACT 5548030 Query 1600728 TGTCGCCCACCT-CGGG 1600743 ||||||| | || |||| Sbjct 5548029 TGTCGCCGATCTGCGGG 5548013 Score = 95.1 bits (104), Expect = 2e-13 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 262418 CGCAACCTCAATCGTGTGATTGACATTAATCACTACCCGGTGCCCGAGGCCCGCCACTCG 262477 ||||||||||| || | || ||| | || |||||||| || | ||||| ||| || Sbjct 2425214 CGCAACCTCAACCGCATCATCGACGTCAACCACTACCCCGTCCAGGAGGCGCGCAACAGC 2425155 Query 262478 AATCTGCGCCATCGACCGATGGGCGTCGGCGTGCAGGGCCTCGCCGACGTGTTTGCCCTG 262537 || | ||||| ||||| || ||||||||||| |||||||||||||||| || | | Sbjct 2425154 AACTTCCGCCACCGACCCATCGGCGTCGGCGTCCAGGGCCTCGCCGACGCCTTCCTCGCG 2425095 Query 262538 ATGGACCTGCCGTGGGAGAGCGCC--GGCGCACGACGTCTCAACCGCGCCATCTTTGAGA 262595 || | |||| | ||| | || ||||| ||| || ||| ||||| |||| Sbjct 2425094 CTGCGCATGCCCTTCGAGTCCCCCGAGGCGCGCGA--GCTGAACAAGCAGATCTTCGAGA 2425037 Query 262596 CGGTCTACCATGCGGCGGCGACGGCGTCGG 262625 | ||||||| ||||| ||||| ||||| Sbjct 2425036 CCATCTACCACGCGGCCCTGACGGAGTCGG 2425007 Score = 95.1 bits (104), Expect = 2e-13 Identities = 124/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 332874 AGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCATTGACGACGTGTTGCAGG 332933 |||| |||||||| || ||| ||||||| |||||||| | | || |||||||| Sbjct 9412965 AGCGGAGGATGGCGCATCGGGATTGCAGGGGCTCGATGATCTTGTTGGATTGGTTGCAGG 9413024 Query 332934 CCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCGACCGGAGGGCCTGTTGGG 332993 | | ||| ||||| ||||| |||| || | ||||| ||| ||||| ||||| |||| Sbjct 9413025 CGAAGGCGAACCGAGTCGTGTTGGAATAAATCTCCATCGTCCTTCGGAGCGCCTGCTGGG 9413084 Query 332994 CCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCTTGTGGCGCCC 333045 | ||| || | || ||| || ||||||||||| | | ||| || | ||| Sbjct 9413085 CACCCGATGTCATGCTGTCTGCTTCGTCGAGGATCACCAGCTTATGCCTCCC 9413136 Score = 87.8 bits (96), Expect = 3e-11 Identities = 110/147 (75%), Gaps = 12/147 (8%) Strand=Plus/Minus Query 2129723 GGCCGTCGACGGTGGTCACCATCTGGTGCACGGCGGCATAGGTCTCGATCGCCATCAGCC 2129782 |||||||||||| |||||||||||| ||||| || || ||||| ||| |||| Sbjct 3494693 GGCCGTCGACGGCCGTCACCATCTGGAACACGGTCGCGTACTCCTCGA-CGCG--CAGCA 3494637 Query 2129783 GGCCGCGCGGCACGACGACGCTGCCGGGCGCGCAGCACACGC---TCAGGTCGTTGCGCA 2129839 || | ||| ||| |||||||||| |||| ||| |||| ||||||| ||| | Sbjct 3494636 GGTC---CGGGACGGTGACGCTGCCG---GCGCCGCAGACGCCGTAGAGGTCGTGGCGGA 3494583 Query 2129840 CCAGATCGACGATCATGAGGTTCTCGG 2129866 | |||||||| ||||| |||||||||| Sbjct 3494582 CGAGATCGACAATCATCAGGTTCTCGG 3494556 >seq2 Length=5461500 Score = 141 bits (156), Expect = 1e-27 Identities = 211/296 (71%), Gaps = 5/296 (2%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||||||||| ||||| ||||| ||||| ||| |||| | Sbjct 1981311 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATC 1981369 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | || | | ||||| | ||| ||||| ||||| ||||| || Sbjct 1981370 TTTCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCT 1981429 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||| | ||||| ||| |||||||| || || ||||| ||||||||| | || Sbjct 1981430 CGCACATTCTCGC-TTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAA 1981488 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || | ||||| ||| | || ||||| || | || ||||| ||||| ||| Sbjct 1981489 CGTTTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATG 1981548 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || ||||| |||||||| || |||||||||||| |||||||| | ||| ||||||| Sbjct 1981549 ATGGAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTACATCAAGGA 1981604 Score = 87.8 bits (96), Expect = 3e-11 Identities = 173/251 (69%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| |||||| || ||| | ||||| ||| |||| | || || || Sbjct 1981992 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 1982051 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || |||||||||| |||||| | ||| |||||||| || || || ||||| || | Sbjct 1982052 CTGCTCGGCATGAATGCCACCT-TGATGAAGCAGTACATCGAGTTC-GTTGCCGATCGTC 1982109 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || | || |||||| || ||||| ||| || | ||||| ||| | ||| Sbjct 1982110 TCCTTGTTGCTCTCGGCAACG-AGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATG 1982168 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| ||||| |||| ||||||||||| || |||||| || | || ||| || Sbjct 1982169 GAGAACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAA 1982228 Query 1456762 AAGGCCGGCGT 1456772 ||||||||||| Sbjct 1982229 AAGGCCGGCGT 1982239 Score = 86.0 bits (94), Expect = 9e-11 Identities = 145/205 (71%), Gaps = 9/205 (4%) Strand=Plus/Minus Query 1600560 CCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCGTGCG 1600619 |||||||| |||| || | || |||||| | ||||| |||||||||| |||||| Sbjct 3928218 CCTTGCCCGTGAGGCATTCGAGCAGCTTGCCGACCGTCATTCGCGACGGGAAACCGTGCG 3928159 Query 1600620 GGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTCGGTGG 1600679 |||| || | ||||| |||||| ||| | ||||| | |||||||| || ||| Sbjct 3928158 GGTTCATGATGATGTCCGGCGTGAGCCCGTTGTC-GGCGAAC--GGCATGTCTTCC-TGG 3928103 Query 1600680 AGCGCACGCTG---CCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTCGCCCA 1600736 | ||| || ||||| |||||| ||||||||||| ||||| | ||||| || | Sbjct 3928102 TCC--ACGATGAGCCCCACCACGCCCTTCTGGCCGTGGCGGGACGAGAACTTGTCACCGA 3928045 Query 1600737 CCTCGGGCTGGCGCATGGCCCGCGT 1600761 ||| ||| | ||| | |||||| Sbjct 3928044 GCTCCGGCCGCCGCGTCTGCCGCGT 3928020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177803966112150