Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 5e-15
seq5 86.0 9e-12
>seq2
Length=5461500
Score = 96.9 bits (106), Expect = 5e-15
Identities = 124/168 (74%), Gaps = 5/168 (3%)
Strand=Plus/Minus
Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718
||||| || ||||| || |||||||| ||||| ||||| || ||||| || || | ||
Sbjct 1981897 TCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCG 1981838
Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778
|||| || |||||||||||||| || || ||||| ||||||||||| | || ||
Sbjct 1981837 AAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCG-AA 1981779
Query 39779 CTTGTA-TCATT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822
| || | || || || ||||| | | ||||||||||| |||||
Sbjct 1981778 CGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731
>seq5
Length=10013798
Score = 86.0 bits (94), Expect = 9e-12
Identities = 348/540 (64%), Gaps = 14/540 (3%)
Strand=Plus/Plus
Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738
|| ||||||||||| | || || | ||||| ||||| || || || || | | | |||
Sbjct 2425699 AGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCC 2425758
Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798
|| || || || || ||||| || | ||| | ||| ||||| || |||| | |||||
Sbjct 2425759 GGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATG 2425818
Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858
|| | || || || || |||| || || || | ||| || ||| | ||||| ||
Sbjct 2425819 GGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATG 2425878
Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAA 69917
|| || || || || || ||||| || ||||| | || | |||| || |
Sbjct 2425879 CGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGC-ACGTCTTGAG 2425937
Query 69918 TGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977
||||| || || ||||| ||||| || || |||||| | || || || ||||
Sbjct 2425938 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAG 2425997
Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037
|| || || || || || || | || || || ||||| ||||| ||| || |
Sbjct 2425998 CTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 2426056
Query 70038 -AGAAAGCAGATTGTATGTTTCAAT----AGCT-GATTCTATATCCCACTGATGAATTCC 70091
|| | |||||||| || || || ||| ||| | | ||| | |||| ||
Sbjct 2426057 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CC 2426111
Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151
| || || ||||| | ||| ||||| ||||| || || | || || | || |
Sbjct 2426112 GACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAG 2426171
Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211
||||| ||| || ||||| || || ||||| || | ||| ||||| | |||||
Sbjct 2426172 GAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 2426231
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908156023000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |