Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 5e-15 seq5 86.0 9e-12 >seq2 Length=5461500 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/168 (74%), Gaps = 5/168 (3%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||| || ||||| || |||||||| ||||| ||||| || ||||| || || | || Sbjct 1981897 TCGTTGGAGAATGTCAGACCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCG 1981838 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778 |||| || |||||||||||||| || || ||||| ||||||||||| | || || Sbjct 1981837 AAAGCACCGCTGAAGAAGATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCG-AA 1981779 Query 39779 CTTGTA-TCATT---ATGTATCCACTTCTGTGCCCAATCAGCTTTCTT 39822 | || | || || || ||||| | | ||||||||||| ||||| Sbjct 1981778 CGTGGACTCCTTGTCTTGGATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731 >seq5 Length=10013798 Score = 86.0 bits (94), Expect = 9e-12 Identities = 348/540 (64%), Gaps = 14/540 (3%) Strand=Plus/Plus Query 69679 AGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCC 69738 || ||||||||||| | || || | ||||| ||||| || || || || | | | ||| Sbjct 2425699 AGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCC 2425758 Query 69739 GGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATC 69798 || || || || || ||||| || | ||| | ||| ||||| || |||| | ||||| Sbjct 2425759 GGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATG 2425818 Query 69799 GGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATA 69858 || | || || || || |||| || || || | ||| || ||| | ||||| || Sbjct 2425819 GGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATG 2425878 Query 69859 TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGT-TTCAA 69917 || || || || || || ||||| || ||||| | || | |||| || | Sbjct 2425879 CGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGC-ACGTCTTGAG 2425937 Query 69918 TGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACAT 69977 ||||| || || ||||| ||||| || || |||||| | || || || |||| Sbjct 2425938 CGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAG 2425997 Query 69978 TTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTC 70037 || || || || || || || | || || || ||||| ||||| ||| || | Sbjct 2425998 CTGCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 2426056 Query 70038 -AGAAAGCAGATTGTATGTTTCAAT----AGCT-GATTCTATATCCCACTGATGAATTCC 70091 || | |||||||| || || || ||| ||| | | ||| | |||| || Sbjct 2426057 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CC 2426111 Query 70092 TATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAA 70151 | || || ||||| | ||| ||||| ||||| || || | || || | || | Sbjct 2426112 GACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAG 2426171 Query 70152 CAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTCTTTCGTA 70211 ||||| ||| || ||||| || || ||||| || | ||| ||||| | ||||| Sbjct 2426172 GAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTA 2426231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908156023000