Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5 105 6e-18 seq11 93.3 4e-14 >seq5 Length=10013798 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| ||||||| |||| ||| | ||||| || || || || || ||||||||||| Sbjct 3224884 GCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3224825 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 || | | || |||| |||||||| || |||||| |||| || ||||| || || ||||| Sbjct 3224824 CAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| || || |||||| | || | | | || | ||||| | | ||| || Sbjct 3224764 GATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCAC 3224705 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || || | ||||| |||| || || || ||||| ||||| Sbjct 3224704 CTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||| ||||| | || | || | || | ||| || || || || || |||||||||| Sbjct 3224657 TGCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGC 3224598 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 ||| | | || |||| |||||||| || ||||| | ||||| || || || || |||| Sbjct 3224597 TCAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCG 3224538 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | ||||| || || |||||| || | | || | ||||| | | || | Sbjct 3224537 GGATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCA 3224478 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || || || || | || || || || || || |||||||||||||| Sbjct 3224477 CCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429 >seq11 Length=1832425 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116 || || || || ||||||||||||| | |||| | ||||||||||| || |||||| | Sbjct 1806796 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAG 1806737 Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176 ||||| |||||||| || || || | ||||| || || ||||||| || | | | Sbjct 1806736 ATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1806677 Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236 || | ||||| | | || || || || || || | || ||||| || || || || Sbjct 1806676 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 1806617 Query 27237 AAGATTTGCAT 27247 || || ||||| Sbjct 1806616 AAAATCTGCAT 1806606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934011583400