Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5 161 3e-34 >seq5 Length=10013798 Score = 161 bits (178), Expect = 3e-34 Identities = 366/539 (68%), Gaps = 10/539 (2%) Strand=Plus/Minus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 |||||| | || ||| | || || ||||||||| ||| || |||||||| || || || Sbjct 2425830 CGGCATCACGCCCATGCTTCGCGTCTTCAACAACACGGCCCGGTACGTCGACCAGGGCGG 2425771 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACG 255090 | ||| || || || || ||| ||||||||||||| ||||||||||||||| || Sbjct 2425770 CAACAAGCGGCCGGGCGCCTTCGCCATCTACCTGGAACCGTGGCACGCCGACGTTTTTGA 2425711 Query 255091 GTTTTTACTGCTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACAC 255150 |||| | ||| | | || ||||| |||||| || ||| |||||| | | | Sbjct 2425710 GTTTCTCGACCTGCGCAAGAACCACGGCAAGGAGGAGGTGCGCGCGCGCGACCTGTTCCT 2425651 Query 255151 CGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGA-ACGAGACGAGACCTGGAGCC 255209 ||| ||||| | ||| || || ||| ||||| || | || ||| ||||| | Sbjct 2425650 CGCGCTCTGGATCCCCGACCTCTTCATGAAGCGCGTCGAGAAGA-ACGGCGACTGGACGC 2425592 Query 255210 TCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGTTTGAAAAAC 255269 ||||||| |||||| | ||||| || | ||||| | || |||||||| || | Sbjct 2425591 TCATGTGCCCCAACGAGTGCCCCGGCCTCGCCGACTGCTACGGCGACGAGTTCGAGGCGC 2425532 Query 255270 TGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCGAAGAAGATC 255328 |||| |||||||||| | ||||| | || | | | || | ||| ||||| || Sbjct 2425531 TGTACGAAAAGTACGAGCGCGAGGGCCGCGGCCGCAAGAC-GGTCCGCGCCCAGAAGCTC 2425473 Query 255329 TGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTATTGCACAAAG 255386 ||| || |||| | || | | ||| ||| || || | || ||| | || |||| | Sbjct 2425472 TGGTACTCGATCCT-CG-AGGCCCAGACGGAGACGGGCAACCCCTTCATGCTGTACAAGG 2425415 Query 255387 AC-CACATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGCTCGAACCTG 255445 || | || |||| | | ||||| ||| ||| ||||| ||| |||| |||||| Sbjct 2425414 ACGCGTGCAACCGCAAGAGC-AACCAGAAGAACCTCGGGACGATCCGCAGCTCCAACCTG 2425356 Query 255446 TGCACCGAGATTACGTTGCACACGTCAGCGCAAGAGGTGGCCGTTTGCAACTTGGCGTC 255504 ||||||||||| | | || || | | | ||||||||||| |||||| | ||||| Sbjct 2425355 TGCACCGAGATCATCGAGTACTCGGCGCCCGACGAGGTGGCCGTCTGCAACCTCGCGTC 2425297 Score = 84.2 bits (92), Expect = 7e-11 Identities = 118/166 (71%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 256115 CTGCGCAACCAGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCA 256174 |||||| | ||||| |||||||||| | |||||| | | | ||||| ||||| Sbjct 2424887 CTGCGCGCCGAGATCAAGGAGCACGGCATCCGCAACAGCCTGCTGCTCGCGCCGATGCCG 2424828 Query 256175 ACCGCCAGCACCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAAC 256234 || |||||||| | || |||||||| ||| || || |||| || || ||||| Sbjct 2424827 ACGGCCAGCACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCGTACACGTCCAAC 2424768 Query 256235 TTCTTCTCGCGCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACC 256280 ||| | ||||||||| | | ||||||||||| ||||| |||| Sbjct 2424767 ATCTACCAGCGCCGCGTCCTCGCCGGCGAGTTCCAGGTGGTCAACC 2424722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334473708375