Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 140 4e-28 seq2 91.5 2e-13 >seq5 Length=10013798 Score = 140 bits (154), Expect = 4e-28 Identities = 552/864 (64%), Gaps = 17/864 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || || | ||||| || ||| ||| || | | |||||| | Sbjct 2425285 GGCAGGGCGAGCGACGCGAGGTTGCAGACGGCCACCTCGTCGGGCGCCGAGTACTCGATG 2425344 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || |||||||| | ||||| ||||| ||||| | Sbjct 2425345 ATCTCGGTGCACAGGTTGGAGCTGCGGATCGTCCCGAGGTTCTTCTGGTTGCTCTTGCGG 2425404 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 |||||||| |||||||| |||||| |||| | |||||||||||||| | | ||| || Sbjct 2425405 TTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCCGTCTGGGCCTCGAGGATC 2425464 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTT 111468 | | ||| | | || | ||| | || | | | | || ||||| ||||||||| Sbjct 2425465 GAGTACCAGAGCTTCTG-GGCGCGGACCGTCTTGCGGCCGCGGCCCTCGCGCTCGTACTT 2425523 Query 111469 TGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGG 111528 | ||| || || || ||||| || || ||||| ||| || || || || || Sbjct 2425524 TTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGG 2425583 Query 111529 ACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCA 111588 || | || | ||| | || | ||| || ||||||||||| ||||| || ||||| Sbjct 2425584 GCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCA 2425643 Query 111589 CAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTC 111648 || | || || || | || |||| || | || ||||| || | || Sbjct 2425644 GAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTC 2425703 Query 111649 AAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC----- 111703 || ||||| | | || |||||||| || || || |||| |||| | ||| Sbjct 2425704 GAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCG 2425763 Query 111704 --TTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTG 111761 | | | ||||| || | || || || || ||| ||| || ||||||||||| | Sbjct 2425764 CTTGTTGCCGCCC----TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGG 2425819 Query 111762 GAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACAT 111821 | | || || | || ||| || || || ||| ||| |||| | | Sbjct 2425820 GCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGC 2425879 Query 111822 CATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAG 111881 ||||||| | || || || || ||| ||| ||||| || ||| | | || | Sbjct 2425880 GGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCACGTCTTGAGCG 2425939 Query 111882 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 111941 | | ||||| || | ||| ||| ||||| || ||| |||||||| |||| || Sbjct 2425940 TGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCT 2425999 Query 111942 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG-- 111999 ||| || || || || |||||||| || || | ||||| ||||||| |||| Sbjct 2426000 GCGCCTGCGGCGTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAACAT--CTTGCT 2426057 Query 112000 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGC 112059 ||||| | ||| ||||| | ||| || |||| || || |||||||| | Sbjct 2426058 CGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCAGATGCCGACCGA 2426117 Query 112060 GACCCGCATGAACATGTACTGTGG 112083 || ||||||| ||||| ||| || Sbjct 2426118 CACGCGCATGATCATGTGCTGCGG 2426141 >seq2 Length=5461500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| ||||||||||| || || || || || || ||||| ||||| Sbjct 1981936 GCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGACCA 1981877 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||||| ||| | || | | ||| | ||| ||||||||| Sbjct 1981876 GGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAGATG 1981817 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 || || || ||||| |||| ||| | || |||||| Sbjct 1981816 CCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAA 1981779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031411220000