Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq2 161 3e-34
seq1 109 2e-18
>seq2
Length=5461500
Score = 161 bits (178), Expect = 3e-34
Identities = 693/1079 (64%), Gaps = 21/1079 (2%)
Strand=Plus/Plus
Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321
|| || ||||| || || || || ||| |||| ||||| || | |||||| || || ||
Sbjct 3943435 GACATCATTGCCAACGACCAGGGCAACCGAACGACGCCCTCGTTCGTTGCCTTCACTGAC 3943494
Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381
|| ||||| ||||||||||| | || || || || | || || || | || ||
Sbjct 3943495 ACGGAGCGCCTGATTGGTGATGCCGCCAAGAACCAGGTGGCCATGAACCCTCACAACACT 3943554
Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTT--TTCTGACAAA-TCTACACAATC 349437
|| ||||| || |||||| | ||||| | ||||| | || | | || ||| |
Sbjct 3943555 GTCTTTGACGCCAAGCGATTGATTGGCCGCAAGTTCAGTGATGCCGAGGTC----CAAGC 3943610
Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497
|| | || || || || || | | | || | ||| |||| || || || || ||
Sbjct 3943611 CGACATGAAGCACTTCCCCTTCAA-GATCATCGACAAG--GGTGGCAAGCCCATAATCGA 3943667
Query 349498 GGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557
||| || | || || || || || || ||||| || || || || ||||| |
Sbjct 3943668 GGTCGAGTTCAAGGGCGAGCAGAAGACGTTCACTCCCGAGGAGATCTCCTCCATGGTCCT 3943727
Query 349558 AGTTAAAATGAAGGAAATTGCTGA-AGCATATTTAGG-TGAAACAGTAACTGATGCTGTT 349615
|| ||| || | ||| || ||| || | || || | ||| || | |||||
Sbjct 3943728 CACCAAGATGCGTGAGACTGCCGAGAGC-TACCTCGGCTGCCA-AGTGACCAACGCTGTC 3943785
Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675
| || || || ||||| || || || ||||||| || || || || || || |
Sbjct 3943786 GTCACCGTTCCTGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTC 3943845
Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735
||||| || | || || || |||| || || || || || ||||| || ||||| |||
Sbjct 3943846 ATTGCCGGTCTCAACGTCCTCCGAATCATCAACGAGCCTACCGCTGCCGCCATTGCCTAT 3943905
Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795
|| || || || | | || || || | || ||||| ||| | |||||||||
Sbjct 3943906 GGTCTCGACAAGAAGGTCGAGGGCGAGCGCAACGTCCTCATTTTCGATCTCGGTGGTGGT 3943965
Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855
|| |||||||| || || || || | || ||||| || || || || || | ||||||
Sbjct 3943966 ACCTTTGATGTCTCTCTCCTTACCATCGAGGAGGGCATCTTCGAGGTCAAGTCGACTGCT 3944025
Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAA 349915
||||| || || | || || || || || || || || || || || || || ||
Sbjct 3944026 GGTGACACTCACTTGGGCGGTGAGGACTTCGACAACCGCCTGGTGAACCACTTCGTCAAT 3944085
Query 349916 GAATTTAAGCGTCAAGC-TAAAATTGA--TATTGGAGATAATCCTAGAGCAATGCGTCGC 349972
|| || ||||| ||||| || | || | | | | || | || |||| ||
Sbjct 3944086 GAGTTCAAGCG-CAAGCACAAGAAGGACCTGTCTACCAACAGCC--GTGCCCTGCGACGT 3944142
Query 349973 CTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATT 350032
|| |||| || || || || || |||||| | | || || || |||| || || ||
Sbjct 3944143 CTCCGAACCGCTTGCGAGCGCGCCAAGCGTACTCTGTCTTCCTCTGCCCAGACGTCGATC 3944202
Query 350033 GAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTT 350092
||||| || ||||| ||| |||| ||||||| | || || || || ||||| ||
Sbjct 3944203 GAAATCGACTCTCTGTTTGAGGGCATCGATTTCTACACCTCCATCACCCGCGCTCGTTTC 3944262
Query 350093 GAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAA 350152
|| || | || |||||| || | | || || | ||||| || || | |
Sbjct 3944263 GAGGAGCTCTGCCAGGATCTGTTCCGCTCCACCATCCAGCCTGTCGACCGCGTCCTGACC 3944322
Query 350153 GATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212
|| || || || ||| | ||| || | || | || | || ||||| || || |||
Sbjct 3944323 GACGCCAAGGTGGACAAGAGCCAGGTTCACGAGATCGTCCTTGTCGGTGGCTCCACTCGT 3944382
Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCA 350272
|| || ||| || || | | | || | || || ||||| || || | ||
Sbjct 3944383 ATCCCCCGAGTGCAGAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCG 3944442
Query 350273 ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331
|| || || || || |||||||| || ||||| || || ||||| ||||| | |||||
Sbjct 3944443 ATCAACCCTGACGAGGCTGTTGCCTACGGTGCCGCCGTCCAGGCTGCTATTCTCTCTGG 3944501
>seq1
Length=2797149
Score = 109 bits (120), Expect = 2e-18
Identities = 132/180 (73%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
|| || || || || || || || || || |||||||| || || || |||||||||||
Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
| | ||||||||| || ||||| || || || ||||| || || | || ||||| ||
Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| | ||||| | || |||||||| |||| ||||| || ||||| || || || |||
Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAAA 1553208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515252943935225
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |