Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq11 172 1e-37 seq5 167 5e-36 seq1 120 7e-22 >seq11 Length=1832425 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || ||||| | |||||| Sbjct 1806817 AGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCT 1806758 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| |||||||| || || | || ||||||||| Sbjct 1806757 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 1806698 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| || || ||||| || ||||||||| Sbjct 1806697 TGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 1806638 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 1806637 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603 >seq5 Length=10013798 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || ||||||| || || Sbjct 3224640 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224581 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| |||||||| |||||||| || | || ||||||||| Sbjct 3224580 TCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 3224521 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || ||||| ||||| || || |||||||| ||||| ||| Sbjct 3224520 TGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTC 3224461 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| ||||| | ||||| Sbjct 3224460 TTTCCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| ||||| || || ||||| || |||||||| ||||| | | ||| Sbjct 3224130 ACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT 3224071 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 || ||||| || ||||||||||| ||||| || ||||| || ||||| ||||| | || Sbjct 3224070 CCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCC 3224011 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| || || || ||||| ||||| || || ||||| || Sbjct 3224010 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAG 3223951 Query 211073 AGTGATCGTCTTTCCCGTGA 211092 ||||| ||||| ||||||| Sbjct 3223950 CGTGATGGTCTTGCCCGTGA 3223931 Score = 154 bits (170), Expect = 3e-32 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || ||||||| || || Sbjct 3224412 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224353 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| |||||||| ||||| | || ||||||||| Sbjct 3224352 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 3224293 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || || ||||| ||||| || || |||||||| ||||| ||| Sbjct 3224292 TGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 3224233 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || |||||||| ||||| || Sbjct 3224232 TTGCCCGTGAGTGTCTTGAC 3224213 Score = 134 bits (148), Expect = 3e-26 Identities = 159/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATC 210961 || ||||| || |||||| ||| || |||||||| || || | ||||| | | || || Sbjct 3224868 AGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGG-TACGGCCGTC 3224810 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| ||||| || ||||| || ||||| || || | || |||||||| Sbjct 3224809 CTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTC 3224750 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||| ||||| || ||||| ||||| ||||| || ||| ||||| | |||||||| Sbjct 3224749 CTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAACGTGATCGT 3224690 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || | ||||| || || | |||||| Sbjct 3224689 CTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 107 bits (118), Expect = 4e-18 Identities = 184/266 (69%), Gaps = 6/266 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||| | |||| || || |||||| |||||||| | || Sbjct 2425383 GTTCTTCTGGTTGCTCTTGCGGTTGCAC---GCGTCCTTGTACAGCATGAAGGGGTTGCC 2425439 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 | ||| | || ||| |||| || | ||| |||| |||||| ||||| ||||| Sbjct 2425440 CGTCTCCGTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCG 2425499 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || ||||||||||| ||| ||| ||||||| || || ||| || Sbjct 2425500 GCCGCGGCCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTC 2425559 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 |||| ||||| ||| |||||||| | ||| |||| | |||| | || || || Sbjct 2425560 GGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCG 2425619 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGA 178355 |||||||||||||| | | |||||| Sbjct 2425620 CTTCATGAAGAGGTCGGGGATCCAGA 2425645 >seq1 Length=2797149 Score = 120 bits (132), Expect = 7e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || |||| | |||| ||||||||| |||||||| || || ||||| Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | | ||| || || || |||| || ||||||||||||||||| || || || ||| Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || |||||||| || || || || || |||||||| ||||| || ||||| || || Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 1553207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150886127375