Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 145 2e-29 seq11 136 9e-27 seq1 120 7e-22 >seq5 Length=10013798 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| || || || || |||| |||||||||| ||| || Sbjct 3224130 ACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT 3224071 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || ||||| || || || || |||||||| || || || Sbjct 3224070 CCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCC 3224011 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 3224010 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGACCTCAAG 3223951 Query 225672 CGTGATCGTCTTGCCCGT 225689 |||||| ||||||||||| Sbjct 3223950 CGTGATGGTCTTGCCCGT 3223933 Score = 141 bits (156), Expect = 2e-28 Identities = 164/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| ||||| || |||||| || || |||| ||||| ||| ||| || Sbjct 3224877 CGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTA 3224818 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || ||||| || || || || ||||||||||| || || Sbjct 3224817 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCC 3224758 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| || ||||| ||||| || | |||||| || ||| Sbjct 3224757 TCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCACCTCCAAC 3224698 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||||||| ||||| || || | ||| | ||||| Sbjct 3224697 GTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || || || || |||| ||||| ||| || || | || || Sbjct 3224412 AGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCC 3224353 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || ||||||||||| || || || |||||||| Sbjct 3224352 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 3224293 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||| ||||| || | ||||| || | ||||| ||| Sbjct 3224292 TGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTC 3224233 Query 225682 TTGCCCGT 225689 |||||||| Sbjct 3224232 TTGCCCGT 3224225 Score = 87.8 bits (96), Expect = 4e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 7545 TAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTT 7604 ||||| ||| | ||||| ||| | || || || || || | ||||| |||||| | Sbjct 2187022 TAATAATCAATTATACAATAGTATAGTAACAGCTCACGCTTTATTAATGATATTCTTTAT 2187081 Query 7605 TGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGC 7664 |||||||| | | | || || || || || || | | | ||||||||| | || | Sbjct 2187082 GGTTATGCCTGCTTTAATCGGAGGATTTGGTAACTTCCTTATGCCTTTAATGGTAGGAGG 2187141 Query 7665 TCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 ||| |||||||| || || || | || ||||||||||| |||||| |||| ||| ||| Sbjct 2187142 TCCCGATATGGCATTCCCTAGATTAAATAATATAAGTTTCTGATTATTACCTCCTAGCTT 2187201 Query 7725 A 7725 | Sbjct 2187202 A 2187202 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559 ||||||||| |||| || | ||||| ||||| | |||||||| ||||| |||| Sbjct 2425387 TTCTGGTTGCTCTTGCGGTTGCACGCGTCCTTGTACAGCATGAAGGGGTTGCCCGTCTCC 2425446 Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619 | || || |||| || | ||| || | || || || ||| | | | | Sbjct 2425447 GTCTGGGCCTCGAGGATCGAGTACCAGAGCTTCTGGGCGCGGACCGTCTTGCGGCCGCGG 2425506 Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679 || || | |||||||||||||||||| |||| || || | |||||| ||| |||| Sbjct 2425507 CCCTCGCGCTCGTACTTTTCGTACAGCGCCTCGAACTCGTCGCCGTAGCAGTCGGCGAGG 2425566 Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739 ||||| || || ||||| | ||| |||| || || | | || || | ||||||| Sbjct 2425567 CCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATG 2425626 Query 193740 AAGAGGTC 193747 |||||||| Sbjct 2425627 AAGAGGTC 2425634 >seq11 Length=1832425 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| || ||| || || |||| ||||| ||| || || Sbjct 1806827 ACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 1806768 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| || |||||||| || || ||||||||||| || || || Sbjct 1806767 GCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCC 1806708 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | ||||| || | Sbjct 1806707 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 1806648 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| ||||| | || || | ||| | ||||| || Sbjct 1806647 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603 >seq1 Length=2797149 Score = 120 bits (132), Expect = 7e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| || | |||||| | |||||||| |||||||| ||||| ||||| Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | || ||| || || || ||||| || |||||||| |||||||| ||| ||| ||| Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || ||||| || | || || || | ||| |||||||||||||| Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGT 1553192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530054052050