Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 3e-14 seq2 82.4 6e-11 >seq5 Length=10013798 Score = 93.3 bits (102), Expect = 3e-14 Identities = 132/181 (73%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 53494 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-CT 53552 |||||||||| | | |||| ||| | ||| |||| |||||||||||||| || | Sbjct 5547983 CGTCAAGGTGCGCGTTCGGACGACCAAGATCCCGCAGATCGGCGACAAGTTTGCCTCGCG 5548042 Query 53553 TCACGGCGCAAAAGGGGACATGCGGAGCG--GTCCTGACTCAGGAGGACATGCCCTTCGA 53610 |||||| ||| ||||| || ||| | | || | | | ||||||||||||||||| Sbjct 5548043 TCACGG-GCAGAAGGGCACCATCGGCGTGACGTACCGGC--AGGAGGACATGCCCTTCAC 5548099 Query 53611 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 53670 ||| || || ||||||| ||||||||||||| ||||| |||| || | ||||| Sbjct 5548100 GCGGGAGGGCGTCACGCCCGACATCATCATCAACCCTCACGCGATTCCGTCGCGAATGAC 5548159 Query 53671 G 53671 | Sbjct 5548160 G 5548160 >seq2 Length=5461500 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 29654 TCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTC 29712 ||||| || || || ||||| || || || |||| | ||| | | ||| || || | Sbjct 4321890 TCCACATGATCCAGATAGACATGCGCGTCACCCATGACGTGCGTGAGGCTC-CCGGGGAC 4321832 Query 29713 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29772 || || ||| |||| | ||||| |||||||| ||||| ||||||||||| ||||| Sbjct 4321831 GAGGTCGCAGACACGAGCAAGCATGTGGGTGAGGAGTGAGTAACTGGCGATGTTGAAGGG 4321772 Query 29773 CACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCA 29814 || ||||| |||||||| | || | || || |||||||| Sbjct 4321771 AACTCCGAGGCCCATGTCGCAAGATCGTTGATACAGCTGGCA 4321730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162828741450