Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq2 91.5 1e-13
seq5 87.8 1e-12
>seq2
Length=5461500
Score = 91.5 bits (100), Expect = 1e-13
Identities = 119/162 (73%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 27148 TCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTC 27206
||||| |||||||| ||||| || ||||| |||| | ||| | | ||| || || |
Sbjct 4321890 TCCACATGATCCAGATAGACATGCGCGTCACCCATGACGTGCGTGAGGCTC-CCGGGGAC 4321832
Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266
|| || ||| |||| | ||||| |||||||| ||||| ||||||||||| |||||
Sbjct 4321831 GAGGTCGCAGACACGAGCAAGCATGTGGGTGAGGAGTGAGTAACTGGCGATGTTGAAGGG 4321772
Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
|| ||||| |||||||| | || | || || ||||| ||
Sbjct 4321771 AACTCCGAGGCCCATGTCGCAAGATCGTTGATACAGCTGGCA 4321730
>seq5
Length=10013798
Score = 87.8 bits (96), Expect = 1e-12
Identities = 131/180 (73%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 48510 CGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-CT 48568
|||||||||| | | |||| ||| | ||| |||| || ||||||||||| || |
Sbjct 5547983 CGTCAAGGTGCGCGTTCGGACGACCAAGATCCCGCAGATCGGCGACAAGTTTGCCTCGCG 5548042
Query 48569 TCACGGCGCAAAAGGGGAC-ATGTG-GAGCCGTCCTGACCCAGGAGGACATGCCCTTCGA 48626
|||||| ||| ||||| || || | | | ||| | | | |||||||||||||||||
Sbjct 5548043 TCACGG-GCAGAAGGGCACCATCGGCGTGACGTACCGGC--AGGAGGACATGCCCTTCAC 5548099
Query 48627 CAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGATGAC 48686
||| || || ||||||| ||||||||||||| ||||| |||| || | |||||
Sbjct 5548100 GCGGGAGGGCGTCACGCCCGACATCATCATCAACCCTCACGCGATTCCGTCGCGAATGAC 5548159
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369506862247325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |