Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq2 105 9e-18 seq5 102 1e-16 >seq2 Length=5461500 Score = 105 bits (116), Expect = 9e-18 Identities = 149/209 (71%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || |||||||| |||||||| ||||| | || | ||||| || ||||| ||| Sbjct 1981939 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 1981880 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 || ||||| || || || || || ||||| || |||| ||||||| || ||||| Sbjct 1981879 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 1981820 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT--- 48317 |||||||| ||||| ||||| || |||||| | || | ||| || |||| | Sbjct 1981819 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGG 1981760 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTT 48346 ||||| || | ||||||||||||||||| Sbjct 1981759 ATCCAACGCAGGGCCCAATCAGCCTTCTT 1981731 >seq5 Length=10013798 Score = 102 bits (112), Expect = 1e-16 Identities = 270/410 (66%), Gaps = 2/410 (0%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATA 78014 || ||||| || || |||||||| | | |||||| || | | || || || ||||| Sbjct 2425567 CCGGGGCACTCGTTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATG 2425626 Query 78015 AAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCT 78074 ||||| || || ||||| || || | || || || || | | || || || || Sbjct 2425627 AAGAGGTCGGGGATCCAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCG 2425686 Query 78075 GTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATT 78134 ||||| || ||||||||||| | || || | ||||| ||||| || || || Sbjct 2425687 TGGTTCTTGCGCAGGTCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATG 2425746 Query 78135 GCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAA 78194 || | | || || || || || || ||||| || | || | ||| ||||| || | Sbjct 2425747 GCGAAGGCGCCCGGCCGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAG 2425806 Query 78195 ACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCA 78254 || | | ||| || | || ||||| || || || || || || | ||| || ||| Sbjct 2425807 ACGCGAAGCATGGGCGTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCG 2425866 Query 78255 CTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCG 78314 | ||||| || ||| | || || || || |||||||| || || | ||| Sbjct 2425867 GTGGCGCGGATGCGGTGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCG 2425926 Query 78315 CAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | |||| || | || |||||||| ||||| || ||||| ||| |||||| Sbjct 2425927 C-ACGTCTTGAGCGTGTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGT 2425975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668148748000