Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 178 3e-39
seq11 174 3e-38
seq1 134 3e-26
seq2 105 1e-17
seq8 84.2 5e-11
>seq5
Length=10013798
Score = 178 bits (196), Expect = 3e-39
Identities = 180/229 (79%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| || |||||||| ||||| ||||||| ||||| || || |||||||||||||| |
Sbjct 3224883 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3224824
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||| ||||| || || || ||||| || |||| || || ||||| |||
Sbjct 3224823 AAG-GTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| ||||||||||| || ||||| ||| |||||| | ||||| |||||||| | ||| |
Sbjct 3224764 GATGCCCTCCTTGTCCTGAATCTT-GCTCTTTACGTTGTCGATTGTGTCCGACGATTCCA 3224706
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || | ||||||||||| || ||||| ||||| ||||| ||||||||
Sbjct 3224705 CCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| || || || || || || || | ||| || || ||||||||||||||
Sbjct 3224655 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224596
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||||||||| | ||||| |||||| |||
Sbjct 3224595 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGG 3224536
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| | || || ||||||| |||||||| | || ||
Sbjct 3224535 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACC 3224476
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||| ||||| || || | ||||| || || || |||||
Sbjct 3224475 TCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429
Score = 145 bits (160), Expect = 2e-29
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| |||||||| ||||| || || || | ||| || || ||||||||||||||
Sbjct 3224427 CCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224368
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| ||||| || || || ||||||||||| | || |||||||| ||
Sbjct 3224367 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGG 3224308
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| || ||||| | || || | ||||| |||||||||| || ||
Sbjct 3224307 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACC 3224248
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092
||||| ||||| ||||| ||||| | ||||| |||| ||
Sbjct 3224247 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGACTA 3224208
Score = 127 bits (140), Expect = 4e-24
Identities = 152/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|| ||||| ||||| || || || || | ||| || || ||||||||||| || | |
Sbjct 3224135 CCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAC 3224076
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || || || ||||| || |||| || || ||||| ||
Sbjct 3224075 AAG-GTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 3224017
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || || | ||||| |||||||| | |||||
Sbjct 3224016 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGAC 3223957
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| |||||
Sbjct 3223956 CTCAAGCGTGATGGTCTTGCCCGT 3223933
>seq11
Length=1832425
Score = 174 bits (192), Expect = 3e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| ||||| || || || || | ||||| || || ||||||||||||||
Sbjct 1806833 ACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1806774
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || || || ||||| ||||| | || |||||||| ||
Sbjct 1806773 CAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGG 1806714
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || ||
Sbjct 1806713 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1806654
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || ||||||||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 1806653 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603
>seq1
Length=2797149
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | | || || ||||| || || || || || |||||||||
Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
|| | ||| || || ||||| ||||||||||| |||||||| | || || | |||
Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|||||||| |||| |||||||| || || |||||||| ||||| | ||||| |||||
Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 1553207
>seq2
Length=5461500
Score = 105 bits (116), Expect = 1e-17
Identities = 172/248 (69%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| || | || | | ||| |||||||| | ||| || | || || |
Sbjct 1981992 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 1982051
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
|| ||||||||||||| | ||| ||| || ||||| ||||| || |||||| |
Sbjct 1982052 CTGCTCGGCATGAATGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTC 1982111
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
| || || || || ||||||| ||||| || || ||||||||||| || ||||||
Sbjct 1982112 CTTGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAG 1982171
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || ||| || || || || |||||||| || ||||| ||| ||||||| |
Sbjct 1982172 AACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAAAAG 1982231
Query 230403 CCCGGTGT 230410
|||| ||
Sbjct 1982232 GCCGGCGT 1982239
>seq8
Length=3860646
Score = 84.2 bits (92), Expect = 5e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726
|| ||||| |||| ||||| | |||| | || ||||||||| ||||||||||
Sbjct 3124933 ACACCACCCTCGAACTTCTTCAAGGCCTTGGACAGGGCACCGAGGGAGTCGCGGTCCAGG 3124992
Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785
||||||||||||| ||||| ||||| | || || | ||||| |||| ||| |||
Sbjct 3124993 TAGTTGGTCGGCTCGTCAAGGACGATAAGATGCGGGCGCTGCCA-CGAGCAGGCAGCGAG 3125051
Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833
||| ||| | || ||||||||||| ||||| ||||| || ||
Sbjct 3125052 GACGGTCTTGACACGCTGGCCACCAGACAGACCACGCATGCGGGAGTG 3125099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738194149050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |