Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5 178 3e-39 seq11 174 3e-38 seq1 134 3e-26 seq2 105 1e-17 seq8 84.2 5e-11 >seq5 Length=10013798 Score = 178 bits (196), Expect = 3e-39 Identities = 180/229 (79%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 || || |||||||| ||||| ||||||| ||||| || || |||||||||||||| | Sbjct 3224883 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3224824 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||| ||||| || || || ||||| || |||| || || ||||| ||| Sbjct 3224823 AAG-GTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || ||||||||||| || ||||| ||| |||||| | ||||| |||||||| | ||| | Sbjct 3224764 GATGCCCTCCTTGTCCTGAATCTT-GCTCTTTACGTTGTCGATTGTGTCCGACGATTCCA 3224706 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 3224705 CCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 3224657 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || || || || | ||| || || |||||||||||||| Sbjct 3224655 CCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224596 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||||||||| | ||||| |||||| ||| Sbjct 3224595 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGG 3224536 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| | || || ||||||| |||||||| | || || Sbjct 3224535 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACC 3224476 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| || || || ||||| Sbjct 3224475 TCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCAT 3224429 Score = 145 bits (160), Expect = 2e-29 Identities = 164/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || |||||||| ||||| || || || | ||| || || |||||||||||||| Sbjct 3224427 CCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 3224368 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||||||||| | || |||||||| || Sbjct 3224367 AGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGG 3224308 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| | || || | ||||| |||||||||| || || Sbjct 3224307 ATGCCCTCCTTGTCCTGAATCTTCGACTTGACATTGTCGATCGTGTCCGAAGACTCCACC 3224248 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATA 283092 ||||| ||||| ||||| ||||| | ||||| |||| || Sbjct 3224247 TCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGACTA 3224208 Score = 127 bits (140), Expect = 4e-24 Identities = 152/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 || ||||| ||||| || || || || | ||| || || ||||||||||| || | | Sbjct 3224135 CCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGAC 3224076 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| || || || ||||| || |||| || || ||||| || Sbjct 3224075 AAG-GTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 3224017 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || || | ||||| |||||||| | ||||| Sbjct 3224016 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATCGTGTCCGACGACTCGAC 3223957 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| ||||| Sbjct 3223956 CTCAAGCGTGATGGTCTTGCCCGT 3223933 >seq11 Length=1832425 Score = 174 bits (192), Expect = 3e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || || || || | ||||| || || |||||||||||||| Sbjct 1806833 ACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 1806774 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || ||||| ||||| | || |||||||| || Sbjct 1806773 CAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGG 1806714 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || ||||||||||| |||||||| | || ||| | ||||| ||||| |||| || || Sbjct 1806713 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1806654 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || ||||||||||| ||||| | ||||| ||||| |||||||| || Sbjct 1806653 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603 >seq1 Length=2797149 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | | || || ||||| || || || || || ||||||||| Sbjct 1553029 TTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGATC 1553088 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 || | ||| || || ||||| ||||||||||| |||||||| | || || | ||| Sbjct 1553089 AATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 1553148 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 |||||||| |||| |||||||| || || |||||||| ||||| | ||||| ||||| Sbjct 1553149 ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCACGAA 1553207 >seq2 Length=5461500 Score = 105 bits (116), Expect = 1e-17 Identities = 172/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| || | || | | ||| |||||||| | ||| || | || || | Sbjct 1981992 ATCATCACCGACGCCGTCACCATTGAGCAGGAGTTCCTCACCGAGGCCCTCCCATGTGCT 1982051 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 || ||||||||||||| | ||| ||| || ||||| ||||| || |||||| | Sbjct 1982052 CTGCTCGGCATGAATGCCACCTTGATGAAGCAGTACATCGAGTTCGTTGCCGATCGTCTC 1982111 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || || || || ||||||| ||||| || || ||||||||||| || |||||| Sbjct 1982112 CTTGTTGCTCTCGGCAACGAGAAGGTGTACAAATCGTCGAACCCCTTCGACTTCATGGAG 1982171 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || ||| || || || || |||||||| || ||||| ||| ||||||| | Sbjct 1982172 AACATCTCCCTCGGTGGCAAGACCAATTTCTTCGAGAAACGTGTTGCCGACTATCAAAAG 1982231 Query 230403 CCCGGTGT 230410 |||| || Sbjct 1982232 GCCGGCGT 1982239 >seq8 Length=3860646 Score = 84.2 bits (92), Expect = 5e-11 Identities = 121/168 (72%), Gaps = 2/168 (1%) Strand=Plus/Plus Query 315667 ACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAGACTCTCGCGGTCCACA 315726 || ||||| |||| ||||| | |||| | || ||||||||| |||||||||| Sbjct 3124933 ACACCACCCTCGAACTTCTTCAAGGCCTTGGACAGGGCACCGAGGGAGTCGCGGTCCAGG 3124992 Query 315727 AAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCATAGAGC-GGCGCCGAT 315785 ||||||||||||| ||||| ||||| | || || | ||||| |||| ||| ||| Sbjct 3124993 TAGTTGGTCGGCTCGTCAAGGACGATAAGATGCGGGCGCTGCCA-CGAGCAGGCAGCGAG 3125051 Query 315786 AACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAGAATG 315833 ||| ||| | || ||||||||||| ||||| ||||| || || Sbjct 3125052 GACGGTCTTGACACGCTGGCCACCAGACAGACCACGCATGCGGGAGTG 3125099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738194149050