Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq11 132 3e-26
seq5 122 6e-23
seq1 95.1 9e-15
>seq11
Length=1832425
Score = 132 bits (146), Expect = 3e-26
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||| ||||| || ||||||||||| ||||||||||| ||| || ||| | ||
Sbjct 1806818 CAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATC 1806759
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| ||||| ||||| | ||||| || || | || | || ||||| ||
Sbjct 1806758 TTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC 1806699
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
| ||||| ||| | | | |||||||||| || |||||||| | || |||||
Sbjct 1806698 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGT 1806639
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| |||||||||||||| ||||| || |||||
Sbjct 1806638 CTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 1806606
>seq5
Length=10013798
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| || | ||| | || || || || || ||||||||||| ||||||||||| ||| |
Sbjct 3224883 CCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 3224824
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| | || |||| || |||||||| ||||| || |||| |||||||| || | ||
Sbjct 3224823 AAGGTACGGC-CGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289
| || ||||| ||| ||||| ||| | | | || ||||| | ||||||||
Sbjct 3224764 GATGCCCTCCTTGTCCTGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCCAC 3224705
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| ||| |||||||| || || | ||||| |||||||| ||||||
Sbjct 3224704 CTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 3224656
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| ||||||||||| ||| || || |||| ||
Sbjct 3224637 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCG 3224578
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | || ||||| || | || | || ||||| |||
Sbjct 3224577 AGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGG 3224518
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||| | | | || ||||| | || |||||||| | || || ||||||
Sbjct 3224517 ATCTTCGACTTAACATTATCGATTGTGTCCGACGACTCCACCTCGAGGGTGATGGTCTTT 3224458
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| ||||| || ||||||||||||
Sbjct 3224457 CCAGTGAGCGTCTTGACAAAGATTTGCATG 3224428
Score = 109 bits (120), Expect = 4e-19
Identities = 146/201 (73%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| ||||| |||||| ||||||||||| ||| || || |||| ||
Sbjct 3224409 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTCCGGCCGTCCTCG 3224350
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||||||||| | ||||| || || | ||| | || ||||| |||
Sbjct 3224349 AGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGA 3224290
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | || ||||| | || |||||||| | || || ||||
Sbjct 3224289 ATCTTCGACTTGACATTGT--CGATCGTGTCCGAAGACTCCACCTCGAGGGTGATGGTCT 3224232
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
| |||||||| ||||| ||||
Sbjct 3224231 TGCCCGTGAGTGTCTTGACGA 3224211
Score = 100 bits (110), Expect = 2e-16
Identities = 139/190 (73%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|| ||||| ||||| |||||| |||||||||||||||| | || | || | || ||
Sbjct 3224117 ACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGACAAGGT-CCGGCCATCCTC 3224059
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| || |||| |||||||| || | ||| | || ||||| |||
Sbjct 3224058 GAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 3223999
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||| || ||| | || ||||| | || || ||||| | ||| || |||
Sbjct 3223998 GATCTTCGACTTGACATTGT--CGATCGTGTCCGACGACTCGACCTCAAGCGTGATGGTC 3223941
Query 44306 TTTCCCGTGA 44315
|| |||||||
Sbjct 3223940 TTGCCCGTGA 3223931
>seq1
Length=2797149
Score = 95.1 bits (104), Expect = 9e-15
Identities = 132/183 (72%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| || | | || | || || |||||||| || |||||||
Sbjct 1553027 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 1553086
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| | |||||||| | || | || ||||| ||| ||||| ||| || |||
Sbjct 1553087 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1553146
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||| | || || || || | |||||||||||| ||||| |||||||||||
Sbjct 1553147 --CGATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 1553204
Query 44326 GAA 44328
|||
Sbjct 1553205 GAA 1553207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990070946275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |