Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq11 150 4e-31 seq5 141 2e-28 seq1 118 3e-21 >seq11 Length=1832425 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| || || ||||||||||| |||||||| || ||| Sbjct 1806609 CAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCCGAC 1806668 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 1806669 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 1806728 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||||||||| | || || ||| || ||| || Sbjct 1806729 CGCCTCATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTGAGCGACTACAACATC 1806788 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| || || Sbjct 1806789 CAGAAGGAGAGCACCCTGCACCTCGT 1806814 >seq5 Length=10013798 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||| ||||| || ||||||||||||||||| || ||| Sbjct 3224432 CAAATCTTTGTCAAGACGCTCACTGGAAAGACCATCACCCTCGAGGTGGAGTCGTCGGAC 3224491 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||| |||||||| || || ||||| || ||||||||| Sbjct 3224492 ACAATCGATAATGTTAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAA 3224551 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| || || |||| || ||| || ||| || Sbjct 3224552 CGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATC 3224611 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 3224612 CAGAAGGAGTCGACGCTCCACCTCGT 3224637 Score = 138 bits (152), Expect = 3e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || ||||| || || || ||||||||||||||||| || ||||| |||| Sbjct 3224211 TCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACGATCG 3224270 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| |||||||||||||| || || |||||||| ||||| || || || | Sbjct 3224271 ACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAGCGCCTCA 3224330 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| ||||| || |||||||| || || |||| || ||| || ||| |||| || | Sbjct 3224331 TCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGAAGG 3224390 Query 178111 AATCAACACTGCATCTTGT 178129 | || || || || || || Sbjct 3224391 AGTCGACGCTCCACCTCGT 3224409 Score = 123 bits (136), Expect = 6e-23 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || |||||||| | ||||||||| || ||| Sbjct 3224660 CAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCGGAC 3224719 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||||||||||| || || ||||| || |||||||| Sbjct 3224720 ACAATCGACAACGTAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCAGCAG 3224779 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGT 178102 || || || |||||||| || |||||||| || || | || |||| ||| || ||| | Sbjct 3224780 CGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTAC-CTTGAGCGACTACAACAT 3224838 Query 178103 CCAAAAAGAATCAACACTGCATCTTGT 178129 ||| || || || || |||||||| Sbjct 3224839 CCAGAAGGAGAGCACTCTACATCTTGT 3224865 >seq1 Length=2797149 Score = 118 bits (130), Expect = 3e-21 Identities = 134/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||| || || || || || ||||| || || || || || || ||||| || Sbjct 1553208 TTTCGTGAAGACCCTAACGGGCAAGACGATTACGCTTGAAGTCGAGTCTTCTGACACTAT 1553149 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| || ||||| ||||| |||||||| || || || || ||||| |||||| || | Sbjct 1553148 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGATCAGCAAAGATT 1553089 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || ||||||||||||||| ||||| | | || || ||| |||| || Sbjct 1553088 GATCTTTGCTGGTAAGCAGCTCGAAGATGGACGGACTTTGTCGGACTACAACATCCAGAA 1553029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730043289550