Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12] 75 sequences; 31,888,966 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq11 176 4e-39 seq5 172 5e-38 seq1 93.3 4e-14 >seq11 Length=1832425 Score = 176 bits (194), Expect = 4e-39 Identities = 181/234 (77%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || ||||| |||||||||||||| ||||| |||||| Sbjct 1806835 CCACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1806776 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 |||||||| | || |||||||||||||||||||| || |||||||||||||| | | Sbjct 1806775 CTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGG 1806716 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811 || | || |||||||||| ||| || ||| ||| | | | |||||| ||||| Sbjct 1806715 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 1806657 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||||| | || ||||| || ||||| || ||||| |||||||||||||| || Sbjct 1806656 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603 >seq5 Length=10013798 Score = 172 bits (190), Expect = 5e-38 Identities = 180/231 (78%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| || || | || ||||| || |||||||||||||| ||||| |||||| Sbjct 3224884 GCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3224825 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || |||| |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 3224824 CAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| | ||||| | ||| | | | ||||| ||| ||| Sbjct 3224764 GATGCCCTCCTTGTCC-TGA-ATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCC 3224707 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| ||| ||||| || || |||| |||||| ||||| ||||||||| Sbjct 3224706 ACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 3224656 Score = 129 bits (142), Expect = 5e-25 Identities = 164/221 (74%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | || || || ||||| ||||||||| ||||| |||||| Sbjct 3224428 GCCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 3224369 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| ||||||||||||||||| || || |||||||||||||| | || Sbjct 3224368 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGG 3224309 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811 | || |||||||||| ||| | || | ||| || | || | ||||| ||||| Sbjct 3224308 GATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATCGTGTCCGAAGACTC 3224252 Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 |||||| | || || || || ||||| || ||||| |||| Sbjct 3224251 CACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGA 3224211 Score = 129 bits (142), Expect = 5e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| ||||| | || || || ||||| ||||||||| ||||| |||||| Sbjct 3224656 GCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 3224597 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| ||||||||||||||||| || || ||||| || ||||| | || Sbjct 3224596 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGG 3224537 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| ||| | | ||||| |||||||| Sbjct 3224536 GATGCCCTCCTTGTCCTGGATCTTCGACTT-AACATTATCGATTGTGTCCGACGACTCCA 3224478 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || |||||||| || || || |||||| Sbjct 3224477 CCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCATG 3224428 Score = 118 bits (130), Expect = 1e-21 Identities = 151/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | || || || ||||| ||||||||| ||||| || ||||| Sbjct 3224136 GCCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 3224077 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | ||| || | || |||||||||||||||||||| ||||||||||| ||||| | || Sbjct 3224076 CAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 3224017 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 | || |||||||||| ||| || ||| || | || | ||||| |||||| Sbjct 3224016 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATCGTGTCCGACGACTCG 3223959 Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838 ||||| | ||| || || || ||||| Sbjct 3223958 ACCTCAAGCGTGATGGTCTTGCCCGT 3223933 Score = 105 bits (116), Expect = 6e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859 || ||||| || ||||| ||||||||| |||||||| |||||| ||| || || ||| Sbjct 1282529 CGGATCGCGCCACGTTCTGGCCTCGCCTGCAAGCACTTCATCGACACGGGTGCGGGCGTC 1282470 Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||||| |||||||||||||| | |||| ||| | ||||||||||||| ||| Sbjct 1282469 ATCGATGCCGACTACCGCGGCCAGGTCAAAATCCTGCTCTTCAACCACGCCGA 1282417 >seq1 Length=2797149 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/184 (72%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||| || | || || | || ||||||||||| || || || | Sbjct 1553027 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 1553086 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| | || || |||| ||||| || |||||||||| ||| || ||| || | Sbjct 1553087 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1553146 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | |||||| ||||| || || | ||| ||||| || ||||| || ||||| || Sbjct 1553147 CG--ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 1553204 Query 41851 GAAA 41854 |||| Sbjct 1553205 GAAA 1553208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303566590000