Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001618945.1_202016-04-12]
75 sequences; 31,888,966 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq11 176 4e-39
seq5 172 5e-38
seq1 93.3 4e-14
>seq11
Length=1832425
Score = 176 bits (194), Expect = 4e-39
Identities = 181/234 (77%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || || || || || | ||| || ||||| |||||||||||||| ||||| ||||||
Sbjct 1806835 CCACCACCACGGAGGCGCAGCACGAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 1806776
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
|||||||| | || |||||||||||||||||||| || |||||||||||||| | |
Sbjct 1806775 CTCAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGG 1806716
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| | || |||||||||| ||| || ||| ||| | | | |||||| |||||
Sbjct 1806715 GGGATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTC 1806657
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||||| | || ||||| || ||||| || ||||| |||||||||||||| ||
Sbjct 1806656 CACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTT 1806603
>seq5
Length=10013798
Score = 172 bits (190), Expect = 5e-38
Identities = 180/231 (78%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | || ||||| || |||||||||||||| ||||| ||||||
Sbjct 3224884 GCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 3224825
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || |||| |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 3224824 CAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGCGG 3224765
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCT-TCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| | ||||| | ||| | | | ||||| ||| |||
Sbjct 3224764 GATGCCCTCCTTGTCC-TGA-ATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTCC 3224707
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||| ||||| || || |||| |||||| ||||| |||||||||
Sbjct 3224706 ACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATG 3224656
Score = 129 bits (142), Expect = 5e-25
Identities = 164/221 (74%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | || || || ||||| ||||||||| ||||| ||||||
Sbjct 3224428 GCCGCCACGCAGACGAAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 3224369
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||| || |||| ||||||||||||||||| || || |||||||||||||| | ||
Sbjct 3224368 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGAGG 3224309
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACGACGACACAGTGTCGCTCGACTC 41811
| || |||||||||| ||| | || | ||| || | || | ||||| |||||
Sbjct 3224308 GATGCCCTCCTTGTCC-TGAATCTTCGACTTGACATTGTCG--ATCGTGTCCGAAGACTC 3224252
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852
|||||| | || || || || ||||| || ||||| ||||
Sbjct 3224251 CACCTCGAGGGTGATGGTCTTGCCCGTGAGTGTCTTGACGA 3224211
Score = 129 bits (142), Expect = 5e-25
Identities = 168/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || || ||||| ||||||||| ||||| ||||||
Sbjct 3224656 GCCACCGCGGAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGCT 3224597
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||| || |||| ||||||||||||||||| || || ||||| || ||||| | ||
Sbjct 3224596 CAGGGTCCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCAGGCGG 3224537
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| ||| | | ||||| ||||||||
Sbjct 3224536 GATGCCCTCCTTGTCCTGGATCTTCGACTT-AACATTATCGATTGTGTCCGACGACTCCA 3224478
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || || |||||||| || || || ||||||
Sbjct 3224477 CCTCGAGGGTGATGGTCTTTCCAGTGAGCGTCTTGACAAAGATTTGCATG 3224428
Score = 118 bits (130), Expect = 1e-21
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || || || | || || || ||||| ||||||||| ||||| || |||||
Sbjct 3224136 GCCGCCACGAAGGCGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGA 3224077
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| ||| || | || |||||||||||||||||||| ||||||||||| ||||| | ||
Sbjct 3224076 CAAGGTCCGGCCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGAGG 3224017
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| || ||| || | || | ||||| ||||||
Sbjct 3224016 GATGCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATCGTGTCCGACGACTCG 3223959
Query 41813 ACCTCCACCGTTATCGTTTTACCCGT 41838
||||| | ||| || || || |||||
Sbjct 3223958 ACCTCAAGCGTGATGGTCTTGCCCGT 3223933
Score = 105 bits (116), Expect = 6e-18
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 85800 CGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGTC 85859
|| ||||| || ||||| ||||||||| |||||||| |||||| ||| || || |||
Sbjct 1282529 CGGATCGCGCCACGTTCTGGCCTCGCCTGCAAGCACTTCATCGACACGGGTGCGGGCGTC 1282470
Query 85860 ATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912
||||| |||||||||||||| | |||| ||| | ||||||||||||| |||
Sbjct 1282469 ATCGATGCCGACTACCGCGGCCAGGTCAAAATCCTGCTCTTCAACCACGCCGA 1282417
>seq1
Length=2797149
Score = 93.3 bits (102), Expect = 4e-14
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
||||||| ||||| ||||| || | || || | || ||||||||||| || || || |
Sbjct 1553027 CCTTCTGGATGTTGTAGTCCGACAAAGTCCGTCCATCTTCGAGCTGCTTACCAGCAAAGA 1553086
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| | || || |||| ||||| || |||||||||| ||| || ||| || |
Sbjct 1553087 TCAATCTTTGCTGATCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 1553146
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | |||||| ||||| || || | ||| ||||| || ||||| || ||||| ||
Sbjct 1553147 CG--ATAGTGTCAGAAGACTCGACTTCAAGCGTAATCGTCTTGCCCGTTAGGGTCTTCAC 1553204
Query 41851 GAAA 41854
||||
Sbjct 1553205 GAAA 1553208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303566590000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |