Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq3 147 3e-30 >seq3 Length=9751215 Score = 147 bits (162), Expect = 3e-30 Identities = 451/688 (66%), Gaps = 22/688 (3%) Strand=Plus/Minus Query 53996 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 54055 || ||||| | || ||| || |||| | || || || ||||| ||||| || || ||| Sbjct 5389559 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 5389500 Query 54056 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 54115 || || || | || || || | | | ||||| || || ||||| || Sbjct 5389499 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 5389440 Query 54116 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGC 54175 ||||| ||| | | || || | ||||||||||||| ||| |||| | | || ||| Sbjct 5389439 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 5389380 Query 54176 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 54235 || ||||| || ||||| || | ||| | || ||||| || | || | | ||| || Sbjct 5389379 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 5389320 Query 54236 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTA 54295 | || || ||||| | ||| ||||| |||| || ||| ||| |||| || || Sbjct 5389319 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 5389260 Query 54296 CTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 54354 || || || || || || ||||| || ||||| | ||||| ||| || | ||| Sbjct 5389259 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 5389201 Query 54355 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 54414 || ||||||||||| || || || ||| |||||| | || || || |||| || Sbjct 5389200 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 5389141 Query 54415 ---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 54471 || || | || || || || || | || || || |||||||| || ||| || | Sbjct 5389140 CGCCTG-CGGC--GTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 5389085 Query 54472 -AGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATAT------CCCATTGATGAATTC 54524 || | ||||||||||||||||| | || || | |||| |||| | Sbjct 5389084 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----C 5389031 Query 54525 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 54584 | || | || ||||| | ||||||||| |||| || ||||||||| ||| | || | Sbjct 5389030 CGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGA 5388971 Query 54585 GCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 54644 | | ||||||| || | ||| || || ||||| || | ||| ||||| || |||| Sbjct 5388970 GGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 5388911 Query 54645 AAATAATAACTGAGTTGAGTTTATCCTT 54672 | | || | |||| ||| | ||||| Sbjct 5388910 AGACGATGGCCGAGTCGAGCTCCTCCTT 5388883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721392197440