Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 178 1e-39 >seq3 Length=9751215 Score = 178 bits (196), Expect = 1e-39 Identities = 316/456 (69%), Gaps = 14/456 (3%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 ||||||| || ||||| ||||| |||||| | || ||| || | |||| | | | | Sbjct 2599094 AGAAGGCTGATTGGGCCCTGCGTTGGATCCAAGACAAGGAGTCCACGTTCGCCCAAAGAC 2599035 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 | || ||||| || |||||||| ||| ||||||| || ||||||| | || || | Sbjct 2599034 TTGTTGCCTTTGCCGCCGTCGAAGGCATCTTCTTCAGCGGTGCTTTCGCCTCAATCTTCT 2598975 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| ||||| |||||||| || ||||| ||| ||||||||||||||| | | Sbjct 2598974 GGCTGAAGAAGCGCGGTCTCATGCCTGGTCTGACATTCTCCAACGAGCTCATCTCGCGTG 2598915 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG--GTGCAGCGACC 117219 | |||||||| || ||| ||||| || ||||| ||||| | || | ||| Sbjct 2598914 ATGAGGGTCTTCACACCGATTTTGCGTG---CCTGTT---GCATTCGCACCTCAACAACC 2598861 Query 117220 G----AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCT 117275 | ||| | | | ||| || ||| |||||||||| ||| |||| |||||| | Sbjct 2598860 GGGCCAGCAAGAAGGTCATCAACGACATCATCACCGACGCCGTCACCATTGAGCAGGAGT 2598801 Query 117276 TCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAA 117334 |||||||||| || || || |||| |||||| || | ||| | |||| ||| Sbjct 2598800 TCCTCACCGAGGCCCTCCCATGTGC-TCTGCTCGGCATGAATGCCACCTTGATGAAGCAG 2598742 Query 117335 TACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAAC 117394 |||||||||||||| ||||| | || || | | || | | || ||| ||||| Sbjct 2598741 TACATCGAGTTCGTTGCCGATCGTCTCCTTGTTGCTCTCGGCAACGAGAAGGTGTACAAA 2598682 Query 117395 ACGCCCAACCCGCTGGACTTTATGAACCTCATCTCC 117430 || | ||||| | ||||| ||| | ||||||| Sbjct 2598681 TCGTCGAACCCCTTCGACTTCATGGAGAACATCTCC 2598646 Score = 170 bits (188), Expect = 2e-37 Identities = 209/285 (73%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| |||||||||||||| |||||||| | ||| ||| | || || Sbjct 2599514 ATCTGGCAAATGTACAAGAAGGCCGAGGCGTCCTTCTGGACGGCCGAAGAGATCGATCTT 2599455 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | ||||||| | || ||||| ||| | ||||| ||||| || | Sbjct 2599454 TCCAAGGATTTGCACGACTGGAACAACCGTTTGAATGACGATGAGCGGTATTTCGTCTCG 2599395 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || |||||||| ||||| |||||||||||||| || ||||| ||| Sbjct 2599394 CACATTCTCGCTTTCTTCGCCGCTTCGGACGGAATCGTCAACGAGAACCTTGTCGAACGT 2599335 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| |||||||| | ||||||| || ||||||||||| || || ||| ||| Sbjct 2599334 TTCAGCGGCGAGGTGCAAATCCCCGAGGCTCGCTGCTTCTACGGTTTCCAAATCATGATG 2599275 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 || || | ||||| || | || ||| | | |||||| ||||| Sbjct 2599274 GAAAATATCCACTCCGAGACCTACTCGCTCTTGATCGACTCGTAC 2599230 Score = 156 bits (172), Expect = 4e-33 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| | || || || | Sbjct 625701 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 625642 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| |||||||||||| | || Sbjct 625641 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCCGA 625583 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || || ||||||| ||| ||||| ||||| || || | |||||||| | |||||| Sbjct 625582 CCAACAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 625523 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||||||||||||| ||| ||||| || ||| ||||| Sbjct 625522 CAACATCCAGAAGGAGAGCACCCTGCACCTCGTGCTGCGC 625483 Score = 140 bits (154), Expect = 3e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 40697 TATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCG 40756 || |||| || || ||||||||||| ||||||||| |||| || || | | |||| Sbjct 4593315 TAGTCGTCAAGACACTCACGGGCAAGACCATCACCCTCGAGGTGGAGTCTTCGGACACAA 4593256 Query 40757 TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGAC 40816 | | | ||||| || || | ||||| ||||||||||| | ||||||||||| | Sbjct 4593255 TCGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCAGCAACGCC 4593196 Query 40817 TCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGA 40876 |||||| || ||||| ||||| || |||| || ||||| | ||||||||||||||||| Sbjct 4593195 TCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGGACCCTGAGCGACTACAACATCCAGA 4593136 Query 40877 AGGAGGCCACGCTGCATCTAGT 40898 ||||| | ||||| || || || Sbjct 4593135 AGGAGTCGACGCTCCACCTCGT 4593114 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||| | || ||||| || ||||| | || || ||| | | Sbjct 4593094 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACGATCACGTTGGAGGTGGAATCGTCG 4593035 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || |||| ||||| ||||||||||| | ||||| Sbjct 4593034 GACACAATCGACAACG-TAAAGAGCAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 4592976 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||| ||||| ||||| || |||| || ||| | | ||||||||| Sbjct 4592975 GCAGCGCCTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCTTGAGCGACTACAA 4592916 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| ||| || ||||| || ||||| || | |||||| Sbjct 4592915 CATCCAGAAGGAGAGCACTCTACATCTTGTACTGCGCCTGCGCGGCGGC 4592867 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771 |||||||||| |||||||| | || ||||| | | |||| | | | ||||| Sbjct 4593592 TCACGGGCAAGACCATCACGCTTGAGGTCGAGTCGTCGGACACGATCGACAATGTCAAGT 4593533 Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831 || || | ||||| ||||||||||| | |||||||| || || || | ||| |||| Sbjct 4593532 CGAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGCCTGATTTTCGCCGGCA 4593473 Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891 | ||||| || || | || ||| | ||| |||||||||||||||||| | ||||| | Sbjct 4593472 AGCAGCTCGAGGATGGCCGGACCTTGTCCGATTACAACATCCAGAAGGAGTCGACGCTCC 4593413 Query 40892 ATCTAGTGTTGCGCTTGAGGGGCGGC 40917 | || || | ||| | | |||||| Sbjct 4593412 ACCTCGTCCTCCGCCTTCGTGGCGGC 4593387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219019673280