Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq3 212 1e-49 >seq3 Length=9751215 Score = 212 bits (234), Expect = 1e-49 Identities = 611/924 (66%), Gaps = 26/924 (3%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||| || || ||| ||| || |||||||| | | |||||| Sbjct 5388928 TACCAGTACTTTGGCTTCAAGACTCTCGAGCGATCCTACCTCCTCAAGCTCAACGGCAAG 5388987 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||||| || ||| ||||||||| | ||||| ||| | ||||| || || || Sbjct 5388988 ATCGTCGAGCGACCGCAGCACATGATCATGCGCGTGTCGGTCGGCATCTGGGGCGACAAC 5389047 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGA-GTGAACGCTGGATGACACATGCCAC 248996 || ||| |||| |||||||||||| ||| | | | | || | || || ||| | Sbjct 5389048 ATCGAGCGCGTCATCGAGACGTACAATCTCATGTCGAGCAAGATGT-TCACGCACGCCTC 5389106 Query 248997 ACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | |||||| |||||||| || | | Sbjct 5389107 GCCGACGCTCTTCAACGCCGGCACGCCGCAGGCGCAGCTGTCGTCGTGCTTCCTCGTCGA 5389166 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 |||| | |||||| |||| ||||| || |||||||| || |||| || | ||| Sbjct 5389167 CATGAAGGACGACAGCATCGAGGGCATCTACGACACGCTCAA---GACGTGCGCCATGAT 5389223 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || | || ||||| ||||| ||| | || | |||||| || | || || || Sbjct 5389224 CTCCAAGATGGCCGGCGGCATCGGCCTCAACATCCACCGCATCCGCGCCACCGGATCCTA 5389283 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 ||| || || || || | | || ||| ||| | ||||| ||| | Sbjct 5389284 CATTGCCGGCACCAACGGTACCTCCAACGGCATCACGCCCATGCTTCGCGTCTTCAACAA 5389343 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 ||| ||| ||| | || |||||| ||| | || ||| | |||||||| || | Sbjct 5389344 CACGGCCCGGTACGTCGACCAGGGCGGCAACAAGCGGCCGGGCGCCTTCGCCATCTACCT 5389403 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 |||| |||||||||||| | || ||||| || ||| || |||||| ||||||| || Sbjct 5389404 GGAACCGTGGCACGCCGACGTTTTTGAGTTTCTCGACCTGCGCAAGAACCACGGCAAGGA 5389463 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | || | ||||| ||||| ||| || || ||| || ||||| | |||||| || Sbjct 5389464 GGAGGTGCGCGCGCGCGACCTGTTCCTCGCGCTCTGGATCCCCGACCTCTTCATGAAGCG 5389523 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCG 249469 |||| || ||||||| |||||||| | | || ||| ||||||| |||| || Sbjct 5389524 CGTCGAGAAGAACGGCGACTGGACGCTCATGTGCCCCAACGAGTGCCCCGG-CCTCGCCG 5389582 Query 249470 ATCTAC-ACGGCGCCGACTTCGACCAAGC-CTATAAGAAA--TACGAATCCAACGGCATC 249525 | || | |||||| ||| |||| | || || || |||| ||||| | | ||| | Sbjct 5389583 A-CTGCTACGGCGACGAGTTCG---AGGCGCTGTACGAAAAGTACGAGCGCGAGGGCCGC 5389638 Query 249526 G---GCAAGACAATCAAGGCTCGGACCCTTTTTGCGAAGGTGGTGGAGTCCCAGATAGAG 249582 | ||||||| || || | || || | | | | ||| |||||| ||| Sbjct 5389639 GGCCGCAAGACGGTCCGCGCCCAGAAGCTCTGGTACTCGATCCTCGAGGCCCAGACGGAG 5389698 Query 249583 ACAGGGGGGCCGTATTAT-TTGTTCAAAGACGCGTGCAACGCCAAGAGTAACCAACGGCA 249641 || ||| || | || ||| ||| |||||||||||| |||||| ||||| | | Sbjct 5389699 AC-GGGCAACCCCTTCATGCTGTACAAGGACGCGTGCAACCGCAAGAGCAACCAGAAGAA 5389757 Query 249642 TCTTGGTACCATCCGCTCGTCAAATCTCTGTGCAGAGGTGATTCAATACTCGTCCAAGGA 249701 || || || |||||| || || || || | ||| | || | |||||| | || Sbjct 5389758 CCTCGGGACGATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCCGA 5389817 Query 249702 GGAGATTGCCGTCTGCAACCTGGC 249725 ||| | |||||||||||||| || Sbjct 5389818 CGAGGTGGCCGTCTGCAACCTCGC 5389841 Score = 118 bits (130), Expect = 2e-21 Identities = 266/399 (67%), Gaps = 22/399 (6%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 |||||||| |||| ||| |||| || ||||| || ||||| ||||| ||||| || || Sbjct 6024621 CTTCCTCACATGCTCTTCTACGGCCCCCCCGGCACTGGCAAAACGTCCACCATTCTCGCT 6024562 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || ||| | |||| ||| | || |||| || || ||||||||||| || Sbjct 6024561 CTCGCCAAAGAACTGTACGGCCCCGAGATGATGAAGTCCCGAGTTCTCGAGCTGAATGCC 6024502 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167 || ||||| || || | | | |||||||| ||| |||||| |||| Sbjct 6024501 TCCGACGAGCGGGGTATATCCATTGTCCGCGAAAAGGTCAAGAACTTTGCACGCATGCAG 6024442 Query 254168 CT--CCAAGATGTCGATTTCGTCGTTCCAA-----CCCGGCTGTCCGCCTTTCAAGCTCG 254220 || |||| | | ||| | | || |||| |||||||| |||||| || Sbjct 6024441 CTGACCAACCCGCCCGCGTCGACTCTGAAAAAATACCCG--TGTCCGCCCTTCAAGATCA 6024384 Query 254221 TGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGA 254280 | ||||| ||||| || || ||||||| || || ||| |||| | || || || | Sbjct 6024383 TCATCCTTGACGAAGCCGATTCCATGACACAAGATGCCCAGAGCGCCTTGCGTCGCACAA 6024324 Query 254281 TGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCA 254340 |||| || || | | || || |||||| || | |||||||||||| | |||| Sbjct 6024323 TGGAAACCTACAGCAAAATCACCCGCTTTTGCTTGATCTGCAACTACGTGACCCGTATCA 6024264 Query 254341 TCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||| ||||||||| ||| ||| |||||| ||||||| Sbjct 6024263 TCGACCCGCTGGCCAGTCGATGCAGCAAGTTCCGATTCA 6024225 Score = 87.8 bits (96), Expect = 4e-12 Identities = 265/406 (65%), Gaps = 20/406 (5%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 ||||| || |||| || |||| || || || || ||||||||||| || || |||||| Sbjct 5646750 CTTCCCCACCTGCTCCTCTACGGACCGCCGGGTACGGGCAAGACGTCGACGATTCTGGCG 5646691 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 || || || | | | |||| | ||| | | || ||||| ||||| ||||| Sbjct 5646690 CTCGCGCGGCGCATCTACGGCGCCGCCAACGTCCGGCAGATGGTGCTGGAGCTCAACGCC 5646631 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTC---CAAGATG 254177 || ||||| ||||| | ||||| || || || |||||||||| ||| | || | | Sbjct 5646630 TCGGACGACCGCGGCATCGACGTGGTGCGGGAGCAGATCAAGACGTTCGCCAGCACCAAG 5646571 Query 254178 TCGAT-TTC-------GTCGTTC--CAACCCG------GCTGTCCGCCTTTCAAGCTCGT 254221 ||| ||| || ||| ||| | | || ||| | ||||||||| | Sbjct 5646570 CAGATCTTCTCCATGGGTGCTTCGGCAAAGGGGAATTCGATGGCCGGC-TTCAAGCTCAT 5646512 Query 254222 GATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGCCGAACGAT 254281 |||||||||||||||||| ||||||| | |||||| || ||||| || | || Sbjct 5646511 CATCCTGGACGAGGCGGACGCCATGACCAACACGGCGCAGATGGCGCTCCGGCGGATCAT 5646452 Query 254282 GGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCGAAGATCAT 254341 ||| | | || | || ||| | || ||| | | |||||||| | ||| | | Sbjct 5646451 GGAAAAGTACACGGTCAACACGAGATTCTGCATCATCGCCAACTACGCGCACAAGCTGAG 5646392 Query 254342 CGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCAGCACCCTC 254387 | || ||||| || || ||| | || || |||||| | ||| Sbjct 5646391 CCCCGCGCTGCTGTCCCGCTGCACGCGCTTCCGGTTCAGCCCGCTC 5646346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766014786304