Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq3 138 1e-27
>seq3
Length=9751215
Score = 138 bits (152), Expect = 1e-27
Identities = 449/688 (65%), Gaps = 22/688 (3%)
Strand=Plus/Minus
Query 66027 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 66086
|| ||||| | || ||| || |||| | || || || ||||| ||||| || || |||
Sbjct 5389559 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATC 5389500
Query 66087 CAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 66146
|| || || | || | || | | | ||||| || || ||||| ||
Sbjct 5389499 CAGAGCGCGAGGAACAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGG 5389440
Query 66147 TCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 66206
||||| ||| | | || || ||||||||||||| ||| ||||| | | || |||
Sbjct 5389439 TCGAGAAACTCAAAAACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGC 5389380
Query 66207 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 66266
|| ||||| || ||||| || | ||| | || ||||| || | || | | ||| ||
Sbjct 5389379 CGCTTGTTGCCGCCCTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGC 5389320
Query 66267 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTA 66326
| || || ||||| ||||| ||||| |||| || ||| ||| | || || ||
Sbjct 5389319 GTGATGCCGTTGGAGGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGG 5389260
Query 66327 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGT 66385
|| || || || || || ||||| || ||||| | ||||| ||| || | |||
Sbjct 5389259 TGGATGTTGAGGCCGATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGT 5389201
Query 66386 ATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445
|| ||||||||||| || || || ||| |||||| | || || || |||| ||
Sbjct 5389200 GTCGTAGATGCCCTCGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTG 5389141
Query 66446 ---GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC 66502
|| || | || || || || || | || || || |||||||| || ||| || |
Sbjct 5389140 CGCCTG-CGGC--GTGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGC 5389085
Query 66503 -AGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATAT------CCCATTGATGAATTC 66555
|| | |||||||||||||| || | || || | |||| |||| |
Sbjct 5389084 TCGACATGAGATTGTACGTCTCGATGACGCGCTCGATGTTGTCGCCCCA--GATG----C 5389031
Query 66556 CTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCA 66615
| || | || ||||| | ||||||||| |||| || ||||||||| ||| | || |
Sbjct 5389030 CGACCGACACGCGCATGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGA 5388971
Query 66616 ACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGT 66675
| ||||||| || | ||| || || ||||| || | ||| ||||| || ||||
Sbjct 5388970 GGAGGTAGGATCGCTCGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGT 5388911
Query 66676 AAATAATAACCGAGTTGAGTTTATCCTT 66703
| | || |||||| ||| | |||||
Sbjct 5388910 AGACGATGGCCGAGTCGAGCTCCTCCTT 5388883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172569639520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |