Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 104 2e-17
>seq3
Length=9751215
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|||||||| || | |||| || | || | || ||| || || ||||| || |||
Sbjct 4592865 TGGCCGCCGCGCAGGCGCAGTACAAGATGTAGAGTGCTCTCCTTCTGGATGTTGTAGTCG 4592924
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|||| || | ||| |||||||| || || || | ||||| || ||||| |||||
Sbjct 4592925 CTCAAGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGC 4592984
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGT-TTTAGCTGTTCCACTGTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| | || | |||| | || | |||||| | | ||
Sbjct 4592985 GGGATGCCCTCCTTGTCC-TGAATCTTGCTCTTTACGTTGTCGATTGTGTCCGACGATTC 4593043
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| | || | |||||||||||||||||| || ||||| || |||||
Sbjct 4593044 CACCTCCAACGTGATCGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 4593094
Score = 86.0 bits (94), Expect = 6e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
||| || || ||||| || ||||||| |||| || |||||||| || || || |
Sbjct 625507 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 625566
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
||| || || || || ||||| || ||||| || ||||| ||| || || | |
Sbjct 625567 GATGAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTT 625626
Query 139693 TTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTAC 139752
|| | ||||||| | ||||||||||| ||| | |||||| || || | || || ||
Sbjct 625627 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 625686
Query 139753 GAATATTTGCAT 139764
||| || |||||
Sbjct 625687 GAAAATCTGCAT 625698
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063826377600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |