Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24]
28 sequences; 32,831,003 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 161 1e-34
>seq3
Length=9751215
Score = 161 bits (178), Expect = 1e-34
Identities = 482/732 (66%), Gaps = 20/732 (3%)
Strand=Plus/Minus
Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920
||||||||||| || | ||| | | || || || |||| || ||||| | || |
Sbjct 5389604 TCGAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGTC 5389545
Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980
|| || || | | || || || ||||| ||||| || || ||||| || || | ||
Sbjct 5389544 CAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAAC 5389485
Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 80040
|| || | | | |||||| || || ||||| || ||||| ||| | | |
Sbjct 5389484 AGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAAA 5389425
Query 80041 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCC 80100
| || | ||||||||||||| ||| ||||| | | ||||| || ||||| || |||
Sbjct 5389424 ACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCCC 5389365
Query 80101 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 80160
|| || | ||| | || ||||| || | || | | ||| || | || || |||||
Sbjct 5389364 TGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGAG 5389305
Query 80161 GTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 80220
||||| ||||| |||| || ||| ||| |||| || || || || ||
Sbjct 5389304 GTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCCG 5389245
Query 80221 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTC 80279
|| || || ||||| || ||||| | ||||| ||| || | ||| || |||||||||||
Sbjct 5389244 ATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCTC 5389186
Query 80280 TATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAGT 80336
||||| || || |||||| | || || || |||| || || || | ||
Sbjct 5389185 GATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--GT 5389129
Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AGACAGTAGATTGT 80395
|| || || || | || || || |||||||| || ||| || | |||| |||||||
Sbjct 5389128 GCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTGT 5389070
Query 80396 ACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGAATTCCTACCGCGACACGCAT 80450
||||||| || ||| ||| | | ||| |||| || |||| || |||||
Sbjct 5389069 ACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACCGACACGCGCAT 5389015
Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510
| ||||||||| |||| || ||||||||| || | || | | ||| ||| ||
Sbjct 5389014 GATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCTC 5388955
Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570
| ||| || || ||||| || | ||| ||||| || ||||| | || ||||||
Sbjct 5388954 GAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGTC 5388895
Query 80571 GAGTTTATCCTT 80582
||| | |||||
Sbjct 5388894 GAGCTCCTCCTT 5388883
Score = 100 bits (110), Expect = 4e-16
Identities = 148/209 (71%), Gaps = 3/209 (1%)
Strand=Plus/Plus
Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019
|| || |||||| ||| |||||||| || | || || |||||||| || || ||
Sbjct 2598887 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 2598946
Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079
|| ||||| || || ||||| || ||||| || || || || || | || ||||||
Sbjct 2598947 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 2599006
Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136
|| ||||| || |||||||||||||||||||| | | | ||| | |||| ||
Sbjct 2599007 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGCGAACGTGGACTCCTTGTCTTGG 2599066
Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTT 50165
||||| | |||||||| ||||||||
Sbjct 2599067 ATCCAACGCAGGGCCCAATCAGCCTTCTT 2599095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268548605920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |