Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drechmeria_20coniospora_20[genbank_20GCA_5F001625195.1_202016-04-24] 28 sequences; 32,831,003 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq3 152 7e-32 >seq3 Length=9751215 Score = 152 bits (168), Expect = 7e-32 Identities = 482/733 (66%), Gaps = 22/733 (3%) Strand=Plus/Minus Query 71944 TCGAACTCGTCTCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 ||||||||||| || | ||| | | | | || || || || || || ||||| | | Sbjct 5389604 TCGAACTCGTCGCCGTA-GCAGTCGGCGAGGCCGGGGCACTCGTTGGGGCACATGAGCGT 5389546 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| || || | | | || || ||||| ||||| || || ||||| || || | || Sbjct 5389545 CCAGTCGCCGTTCTTCTCGACGCGCTTCATGAAGAGGTCGGGGATCCAGAGCGCGAGGAA 5389486 Query 72063 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 72122 || || | | | |||||| || || ||||| || ||||| ||| | | Sbjct 5389485 CAGGTCGCGCGCGCGCACCTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGAAACTCAAA 5389426 Query 72123 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCC 72182 || || | ||||||||||||| ||| ||||| | | |||||||| ||||| || || Sbjct 5389425 AACGTCGGCGTGCCACGGTTCCAGGTAGATGGCGAAGGCGCCCGGCCGCTTGTTGCCGCC 5389366 Query 72183 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 72242 ||| || | ||| | || ||||| || | || | | ||| || | || || ||||| Sbjct 5389365 CTGGTCGACGTACCGGGCCGTGTTGTTGAAGACGCGAAGCATGGGCGTGATGCCGTTGGA 5389306 Query 72243 TGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACC 72302 | ||| ||||| |||| || ||| ||| |||| || || | || || || Sbjct 5389305 GGTACCGTTGGTGCCGGCAATGTAGGATCCGGTGGCGCGGATGCGGTGGATGTTGAGGCC 5389246 Query 72303 TATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCT 72361 || || || ||||| || ||||| | ||||| ||| || | ||| || |||||||||| Sbjct 5389245 GATGCCGCCGGCCATCTTGGAGATCATGGCGCA-CGTCTTGAGCGTGTCGTAGATGCCCT 5389187 Query 72362 CTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG---GTGACGACTAG 72418 | || || || ||| |||||| | || || || |||| || || || | | Sbjct 5389186 CGATGCTGTCGTCCTTCATGTCGACGAGGAAGCACGACGACAGCTGCGCCTG-CGGC--G 5389130 Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTC-AGACAGTAGATTG 72477 | || || || || | || || || |||||||| || ||| || | |||| |||||| Sbjct 5389129 TGCCGGCGTTGAAGAGCGTCGGCGAGGCGTGCGTGAA-CATCTTGCTCGACATGAGATTG 5389071 Query 72478 TACGTCTCAAT----AGCT-GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCA 72532 |||||||| || ||| ||| | | ||| |||| || |||| || |||| Sbjct 5389070 TACGTCTCGATGACGCGCTCGATGTTGTCGCCC-CAGATG----CCGACCGACACGCGCA 5389016 Query 72533 TTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTT 72592 | | ||| ||||| |||| || ||||||||| || | || | | ||||||| | Sbjct 5389015 TGATCATGTGCTGCGGTCGCTCGACGATCTTGCCGTTGAGCTTGAGGAGGTAGGATCGCT 5388956 Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 | | ||| || || ||||| || | ||| ||||| || ||||| | || |||| | Sbjct 5388955 CGAGAGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCGCGGTCGTAGACGATGGCCGAGT 5388896 Query 72653 TGAGTTTATCCTT 72665 ||| | ||||| Sbjct 5388895 CGAGCTCCTCCTT 5388883 Score = 95.1 bits (104), Expect = 2e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||| ||||| | || ||||||| ||| || || ||||||||| Sbjct 5390768 TCCTGGTCGACGGTGAACTGGATGGGCGCGGCGGCGGCTTGCGTCCGCAGGTAGTACATG 5390709 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || || ||||| |||| ||| ||| ||||| ||||| | ||| | | Sbjct 5390708 CCCGTCTTGAGGCCGAGCTTCCAGCCGGCAAAGTGCATGCTCGTGATCTTGCCCATGGTC 5390649 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || |||||||| || | |||||| || ||||||||||| || | ||| || Sbjct 5390648 GGGTCCTTCATGTGAATGTTGAGCGACTGGGACTGGTCGATGAAGGCGCCGCGGTCGGCC 5390589 Query 70969 GCCAT 70973 ||||| Sbjct 5390588 GCCAT 5390584 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || |||||| ||| ||||||||||| | || | |||||||| || || || Sbjct 2598887 CACGCAAAATCGGTGTGAAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAATGTCAGA 2598946 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || || ||||| || ||||| || || || || || | || |||||| Sbjct 2598947 CCAGGCATGAGACCGCGCTTCTTCAGCCAGAAGATTGAGGCGAAAGCACCGCTGAAGAAG 2599006 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC----TGTCATG 42240 || ||||| || || |||||||||| |||||| | | ||| | || |||| || Sbjct 2599007 ATGCCTTCGACGGCGGCAAAGGCAACAAGTCTTTGGGC-GAACGTGGACTCCTTGTCTTG 2599065 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 ||||| | |||||||| |||||||| Sbjct 2599066 GATCCAACGCAGGGCCCAATCAGCCTTCTT 2599095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138965101280